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SCN18_30_10_14_R2_B_scaffold_19492_5

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 2211..2444

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F723A similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 78.0
  • Bit_score: 137
  • Evalue 3.00e-30
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 78.0
  • Bit_score: 137
  • Evalue 7.30e-30
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 79.0
  • Bit_score: 136
  • Evalue 1.90e-30

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Taxonomy

SCNPILOT_CONT_750_P_Mesorhizobium_63_10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 234
ATGGCTTCCGCTTCGGGCTTCCGCAGCGATTTGCTGGCAGCCATTCCCAGCCTTCGCGCATTTGCCGTTTCCCTCGCACAGAACGCCGACAAGGCCGACGATCTCGTGCAGGAGACGCTGGTGAAGGCATGGGACAAGCAGAAGAGCTTCCAGCCCGGTACGAACCTGAAGGCGTGGCTGTTCACCATCCTGCGCAATGAATTCTATTCGCAGATGCGCAAGCGGTGCCGCGAA
PROTEIN sequence
Length: 78
MASASGFRSDLLAAIPSLRAFAVSLAQNADKADDLVQETLVKAWDKQKSFQPGTNLKAWLFTILRNEFYSQMRKRCRE