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SCN18_30_10_14_R2_B_scaffold_20108_5

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 1809..2237

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI0003782FF9 similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 142.0
  • Bit_score: 225
  • Evalue 2.00e-56
DNA-binding transcriptional regulator {ECO:0000313|EMBL:CDX53611.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 142.0
  • Bit_score: 225
  • Evalue 3.70e-56
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 142.0
  • Bit_score: 217
  • Evalue 2.00e-54

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGCGACTGACAGATTTTTCCGACTATTCGCTGCGACTGCTCATGTATGCCGCAGCCCGGAACGACCGGCTGATCACCATCGAGGAGACGGCCGAACTCTACGGCATTTCGCGGGCGCATCTGATGAAGGTCGCCAACCAGTTGACGCGCTCCGGTTTCCTGAATGCGGTCAGGGGCCGTTCCGGCGGGCTCCAGCTTGCCGAAAAGCCGGAAAATATCCGGCTTGGCGACGTACTGCGCGTGACGGAGCCGGATTTCGCGCTGGTCGAATGTTTCCGCGGCAAGAATAGCTGCCTCATCACGCCCTGCTGCCGGTTGCGCGGTATCCTGAACGAGGCGCTTACCGCCTTTTCCGATACGCTCGACGGCTATACGCTCGCCGATCTGCTGCTCGCGCCGGAGGATTTCGGCATCCTGCCGGCGGCATGA
PROTEIN sequence
Length: 143
MRLTDFSDYSLRLLMYAAARNDRLITIEETAELYGISRAHLMKVANQLTRSGFLNAVRGRSGGLQLAEKPENIRLGDVLRVTEPDFALVECFRGKNSCLITPCCRLRGILNEALTAFSDTLDGYTLADLLLAPEDFGILPAA*