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SCN18_30_10_14_R2_B_scaffold_22203_1

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(3..1316)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F0C24 similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 438.0
  • Bit_score: 724
  • Evalue 4.30e-206
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 441.0
  • Bit_score: 713
  • Evalue 1.10e-202
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 442.0
  • Bit_score: 709
  • Evalue 4.00e-202

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Taxonomy

SCNPILOT_CONT_750_P_Mesorhizobium_63_10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
ATGGCAACAAAGGAAAAGGAAGAGGTCGAAACCGAACGCGAGGCGGCAACCGACGGCCCCCTGCTCGACCTTTCCGACGACGCGGTCAAGAAGATGATCAAAGCCGCGAAGAAGCGCGGCTATGTCACGATGGACGAACTGAATTCCGTCCTGCCTTCCGAAGAGGTCACGTCGGAGCAGATCGAGGATACGATGGCGATGCTCTCCGATATGGGCATCAATGTCGTCGAGGACGACGAGGCGGCCGAGGAGCCGGAGGCCGACTCTTCCGAAAGCGAGGACGAGGCCAAGGAACTTGCCGAGCAGAACGGTACGGCGGTGGCTACCGCTCCTGCGAAAAAGGAGCCTACCGACCGCACCGACGACCCGGTTCGCATGTATCTGCGCGAGATGGGTTCGGTCGAGCTTCTGTCGCGCGAGGGCGAGATCGCCATCGCCAAACGCATCGAGGCCGGCCGCGAGACCATGATCGCGGGCCTGTGCGAGAGCCCGCTCACCTTCCAGGCCATCATCATCTGGCGCGACGAGCTGAACGAGGCGAAGATCCTCTTGCGCGAGATCATCGATCTCGAGGCGACCTATGCCGGCCCCGAGGCCAAGCAGGCGCCGGTCGTCGTGCGCACGGAAGAAGCCAACGGCAAGCCGCAGGAAGAGCAACGTAACGGCCGCCGGCCGATGGGTCGCGATGACGACGACATCACCAATGTCGGCGGTGAAACCCGCCCCGAAGAGGACGACGAGGAAGAGGACGAGGCCAATCTGTCGCTGGCCGCCATGGAAGCGGAACTGCGCCCGCAGGTCATGGAGACACTGGACATCATCGCCGACACCTATAAGCGTCTTCGCAAGCTGCAGGACCAGCAGGTCGAGAACCGCCTCGCCGCCGCAGGTACGCTGTCGCCGAGCCAGGAGCGCCGCTACAAGGAACTGAAAGAGCAACTTATCAAGGCGGTGAAGTCGCTGTCGCTCAACAATGCCCGTATCGAGGCGCTGGTCGAGCAGCTTTACGACATCAACAAGCGGCTTGTGCAGAACGAAGGCAGGCTCTTGCGGCTGGCCGAGAGTTACGGCGTGCGCCGTGACAATTTCCTCGAAGTCTATCAGGGCTCCGAGCTCGACCCCAACTGGATGAAATCGGTCTCCAACCTGTCCGCACGCGGCTGGAAGGAGTTTACCAAGGGCGAGAAGGAGAAGATCCGCGATATCCGCTCCGAGATCCAGAACCTGGCCACCGAAACCGGCATCTCGATCGCCGAGTTCCGCAAGATCGTCAACCAGGTGCAGAAGGGCGAGCGCGAAGCCGCCATTGCCAAG
PROTEIN sequence
Length: 438
MATKEKEEVETEREAATDGPLLDLSDDAVKKMIKAAKKRGYVTMDELNSVLPSEEVTSEQIEDTMAMLSDMGINVVEDDEAAEEPEADSSESEDEAKELAEQNGTAVATAPAKKEPTDRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRETMIAGLCESPLTFQAIIIWRDELNEAKILLREIIDLEATYAGPEAKQAPVVVRTEEANGKPQEEQRNGRRPMGRDDDDITNVGGETRPEEDDEEEDEANLSLAAMEAELRPQVMETLDIIADTYKRLRKLQDQQVENRLAAAGTLSPSQERRYKELKEQLIKAVKSLSLNNARIEALVEQLYDINKRLVQNEGRLLRLAESYGVRRDNFLEVYQGSELDPNWMKSVSNLSARGWKEFTKGEKEKIRDIRSEIQNLATETGISIAEFRKIVNQVQKGEREAAIAK