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SCN18_30_10_14_R2_B_scaffold_22345_1

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 2..808

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C11E3B similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 268.0
  • Bit_score: 513
  • Evalue 9.10e-143
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 268.0
  • Bit_score: 515
  • Evalue 3.40e-143
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 268.0
  • Bit_score: 510
  • Evalue 2.20e-142

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Taxonomy

SCNPILOT_CONT_750_P_Mesorhizobium_63_10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
AACCTGGCCACCGAAACCGGCATCTCGATCGCCGAGTTCCGCAAGATCGTCAACCAGGTGCAGAAGGGCGAGCGCGAAGCGGCGATCGCCAAGAAGGAGATGGTCGAGGCCAATCTGCGTCTCGTCATTTCCATTGCAAAGAAATACACGAACCGCGGCCTGCAATTCCTTGATCTCATTCAGGAAGGTAATATCGGTCTGATGAAGGCGGTGGACAAGTTCGAGTATCGCCGTGGCTACAAGTTCTCCACTTACGCGACATGGTGGATCCGGCAGGCGATCACCCGTTCGATCGCCGACCAGGCGCGCACCATCCGCATCCCGGTCCACATGATCGAGACGATCAACAAGATCGTCCGCACCTCGCGCCAGATGCTGCACGAGATCGGCCGCGAGCCGACGCCGGAGGAACTGGCCGAAAAGCTCGCCATGCCGCTCGAGAAGGTGCGCAAGGTGCTGAAGATCGCCAAGGAGCCGATCAGCCTCGAAACGCCGGTGGGCGACGAGGAGGATTCGCATCTCGGCGATTTCATCGAGGACAAGGGCGCGGTGTTGCCGATCGACGCCGCCATCCAGGCCAATCTGCGTGAAACCACGACACGGGTGCTGGCTTCGCTGACGCCGCGCGAGGAGCGCGTGCTCAGGATGCGCTTCGGCATCGGCATGAACACCGACCACACGCTGGAAGAAGTCGGCCAGCAATTCTCGGTGACGCGCGAGCGCATCCGCCAGATCGAAGCCAAGGCGCTCAGGAAGCTCAAACACCCGAGCCGGTCGAGGAAGCTGAGGAGCTTTTTGGACAGCTAG
PROTEIN sequence
Length: 269
NLATETGISIAEFRKIVNQVQKGEREAAIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLKIAKEPISLETPVGDEEDSHLGDFIEDKGAVLPIDAAIQANLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDS*