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SCN18_30_10_14_R2_B_scaffold_26366_3

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 1425..1922

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 166.0
  • Bit_score: 241
  • Evalue 7.60e-61
3-isopropylmalate dehydratase small subunit n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4K0_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 166.0
  • Bit_score: 241
  • Evalue 5.40e-61
leuD; 3-isopropylmalate dehydratase small subunit similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 166.0
  • Bit_score: 241
  • Evalue 1.50e-61

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGAGCGGGCGCATCTTCCTCTTCGGCGACGATATCGATACCGACCAGCTTGCGCCGGGCCAGTATATGAAAGGCGGGCTTGCCGAGCTAGCCGCCCATTGCCTCGAAGCGGTAAGGCCGGATTTCCCGGCGAGTGTCGAGCCCGGCGACATCGTGGTCGCCGGACGCAATTTCGGCATGGGCTCCTCGCGCGAGCAGGCGGCCGAGGCGCTGAAATTCCTGGGCGTCGCGGGGGTCGTGGCGCGCTCCTTCGCCGGCATCTTCTATCGCAACGCCATCAATCTCGGCCTGCCGGTCATCGTGGCGGAAGGCGATCTCGGCGCTGTTCGGGACGGGATGGAAGCGGTGCTCGATCTCGACGCGGGAGAATTGCGGCCGGCCGGCGCCGCGCCGATCGCGCTCGAGCCGCTGCCCGACAATCTGAAAACGCTGCTCGCCGATGGCGGGCTGGTGCCGCATCTGAAGAAGCGCTTGGCGGCGGGGCGCAACCGGGACTGA
PROTEIN sequence
Length: 166
MSGRIFLFGDDIDTDQLAPGQYMKGGLAELAAHCLEAVRPDFPASVEPGDIVVAGRNFGMGSSREQAAEALKFLGVAGVVARSFAGIFYRNAINLGLPVIVAEGDLGAVRDGMEAVLDLDAGELRPAGAAPIALEPLPDNLKTLLADGGLVPHLKKRLAAGRNRD*