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SCN18_30_10_14_R2_B_scaffold_27929_2

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 1275..1850

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 190.0
  • Bit_score: 340
  • Evalue 1.10e-90
PREDICTED: tryptophan synthase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C0FC74 similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 190.0
  • Bit_score: 352
  • Evalue 2.50e-94
tryptophan synthase, alpha subunit similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 190.0
  • Bit_score: 340
  • Evalue 2.80e-91

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGACCTCGACCCGCATCGACCGCCGCATGGCGAAGCTGAAGCAAGAAGGCCGGCCGGCGCTCGTCACCTATTTCATGGGCGGCGATCCCGACTACGCCACCTCGCTGTCGATCATGAAGGCGCTGCCGAAGGCAGGCAGCGACGTGATCGAGCTCGGCATGCCCTTCTCCGACCCGATGGCCGACGGCCCGGCGATCCAGGCGGCAGGGCTGCGCGCACTGAAGGCCGGCCAGACGCTGGCGAAGACGCTGGCCATGGCGGCCGAGTTCCGCAAGGGCGACGACGAAACGCCGATCGTCATGATGGGCTACTACAACCCGATCTACATCTACGGCGTCGAGCGCTTCCTGGCCGACGCCAGGGCGGCCGGCGTGGACGGCCTGATCGTCGTCGACCTGCCGCCGGAGATGGACGGCGAGCTCTGCATCCCGGCCGTCGAGGCCGGCATCAACTTCATCCGCCTGGCGACGCCGACGACGGACGACAGGCGCCTGCCGAAGGTGCTCGAGAACACGGCGGGCTTCGTCTACTACGTCGCGATGACCGGCATTACCGGGGCGGCACTCGCCGACACC
PROTEIN sequence
Length: 192
MTSTRIDRRMAKLKQEGRPALVTYFMGGDPDYATSLSIMKALPKAGSDVIELGMPFSDPMADGPAIQAAGLRALKAGQTLAKTLAMAAEFRKGDDETPIVMMGYYNPIYIYGVERFLADARAAGVDGLIVVDLPPEMDGELCIPAVEAGINFIRLATPTTDDRRLPKVLENTAGFVYYVAMTGITGAALADT