ggKbase home page

SCN18_30_10_14_R5_P_scaffold_992_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(25..903)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DB9C54 similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 275.0
  • Bit_score: 297
  • Evalue 8.60e-78
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EZQ14329.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 285.0
  • Bit_score: 362
  • Evalue 4.00e-97
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 282.0
  • Bit_score: 265
  • Evalue 1.30e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGGAGGGGAATGTGAACGGCTCATGGGCCGGGTTCATCGGTTGCCAGATCGGCGCTGCCCTCGTGGCGGCGCTGGTGGCGTCGCCTGTGGCTGCCGCCGAACCTGCGCCGCGGCGCGTGGTGTCGATGAATGTGTGCACGGACCAGCTTGCCATGCTCATAGCCGGCGAGGGCCAGCTTCACTCGGTTTCGGCGCTGGCGCGCGACCCCAATTCCTCGGCAATGGCGAAGGAGGCCGAAGCCGTCGCCACTAACCACGCGCTGGCCGAAGAAATCTTCCTGATGGAGCCCGATCTCGTGCTGGCCGGCACGTTTTCGTCAAGGGCTACGGTCAACCTGTTGCGCGAACTCGGCGTTAAGGTGGAGGAGTTTGCGCCGTCGCGGTCGTTCGAGGACATTCGCGAGAGCATCCTGCGTGTCGGCGAGCTTTTGCAACGGCAGGAGCGCGCCGGCGAACTTGTTGGCGAACTGGATGCCGGTCTTGCAGAGCTTAAGGCGCAAAAGCCGTCCGGGCGCTCCATCGCGCTTTACGATGCCAACAGCTACACGACCGGTGGGGGCACGCTGGCCAACGAGATTTTTAACGCCGCCGGGCTCGTCAATATTGCCGAGAAGCTCGGTATCGTCGGCAGTACGCGACTGCCGCTGGAACTTCTGATCACCGAGCAACCGGACATGATCGCGACCAGCTTTCGCTCCTATGGCGGCGCGCCGGCCCTGGCGCAGGAGAATTTCGTGCATCCAGCATTCAAGGCGCTCGAGGCGCAGAAGCAGGGCGTCGGCGTGCCGGTGCCGAACATGATCTGTGGGGCACCGTTTACGCTGCAGGCGGCTTTCGTGCTGCAACGGGCGGCTCTGCAAGGGCAGGCGCGGCCGTGA
PROTEIN sequence
Length: 293
MEGNVNGSWAGFIGCQIGAALVAALVASPVAAAEPAPRRVVSMNVCTDQLAMLIAGEGQLHSVSALARDPNSSAMAKEAEAVATNHALAEEIFLMEPDLVLAGTFSSRATVNLLRELGVKVEEFAPSRSFEDIRESILRVGELLQRQERAGELVGELDAGLAELKAQKPSGRSIALYDANSYTTGGGTLANEIFNAAGLVNIAEKLGIVGSTRLPLELLITEQPDMIATSFRSYGGAPALAQENFVHPAFKALEAQKQGVGVPVPNMICGAPFTLQAAFVLQRAALQGQARP*