ggKbase home page

SCN18_30_10_14_R5_P_scaffold_1245_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(1..318)

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1A5_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 100.0
  • Bit_score: 135
  • Evalue 2.70e-29
oligopeptide transport ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 102.0
  • Bit_score: 115
  • Evalue 8.10e-24
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 100.0
  • Bit_score: 138
  • Evalue 3.40e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGGCTGACGCCACCAACCTTCTGGTCATCGACCGGCTTACCAAGCGCTTCGACAGCGGCGCTGGTCTGTTCGCGCCGCGCCGCAGCATGACGGCGGTGCGCGATGTCAGCCTCGCCGTCAGCCGTGGATCGGTGGTCGGCGTGGTTGGCGAGAGCGGCTGTGGAAAGTCGACCTTGGCGCGGCTGGTTTTGCGTCTGCTGGAGCCGACGCAAGGGACCGTGCATTTCGATGGCGTCGATCTCGGCAAGCTTGCGCCACGTGATCTACGCAAGGCGCGGCGGCGCATGCAGATGGTGTTCCAGGACCCATACTCCTCG
PROTEIN sequence
Length: 106
MADATNLLVIDRLTKRFDSGAGLFAPRRSMTAVRDVSLAVSRGSVVGVVGESGCGKSTLARLVLRLLEPTQGTVHFDGVDLGKLAPRDLRKARRRMQMVFQDPYSS