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SCN18_30_10_14_R5_P_scaffold_1245_6

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(4727..5638)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, RpiR family n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1A0_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 286.0
  • Bit_score: 386
  • Evalue 1.90e-104
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EEW25298.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 286.0
  • Bit_score: 386
  • Evalue 2.70e-104
HTH-type transcriptional regulator-like protein similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 281.0
  • Bit_score: 308
  • Evalue 1.40e-81

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGAAGCAAGAAATCGATCAGGACAAAGCGCCGTCCGATCTGGTTCAGCGCCTGAAGGCAAGTCTTGGCAACGCCACCAGGACAGAAAGCGCCATTGCCAACTACATCCTGGGCAACCTGCAGAGCCTTCCCTTTGAAACCGCAGCCTCGCTCGGGCAGAAGGTCGGCGTCAGCGAGGCTTCGATCGGCCGCTATTGCCGGGCCATCGGCTATCGTCATTTCAAGGATCTGAAGGGCAGGCTTCAAGCCGACCTCGGCGACACTGCCTGGCTGATCGGCGATCGGTTGCGCGACTTTCATGCCAGAAGCCTCGAAGGCGCGACGGAATTGGCGCATGCGCTGGAGAAGGAAATTGCGGCTGTGGTCGCCGTTTATGAGGTGGCCGCCACGACAGACTTCGCCCGTGCGGTGGGACGCCTGACCAGATGTAAAGAGGTGTATGTCGCCGGCTTTCAGACCGAGCGCGGTCATGCCGCGCAACTCGTCCACAACCTCCAGTACCTGCGCCCCGGCGTTCATCTTGCCGATCTTGCCGGCGGGCATTTTGCCGAGATTCTTCTGGCCGATCCAAAATCGACCGCGCTGGTCCTGATCGACGGCCGGCGCTATTCGCGCCTTACCCAACGTCTTGCCATGGAAGCAAAAGCTGCAGGCATCGGCGTCACGTTGATCACCGATCCCTATTGCGACTGGGCGCATGGCAACGCCGACGAAGTGTTCGTCGTGCAGACCGATCTCAACAGTTTCTGGGACACGACATCGGCGATGTCGAGCCTGGTTGGCTTGATCGTCAGCGGTGTCTTCAAGGAACTCGGTGCCGGCGTGGAGGAACGGATGGTGCGGATATCGTCGCTTTACAATGAGTTCGTCGGCCATACCGGCATCCAGAGGGTATCGCAAAAACAGGACTGA
PROTEIN sequence
Length: 304
MKQEIDQDKAPSDLVQRLKASLGNATRTESAIANYILGNLQSLPFETAASLGQKVGVSEASIGRYCRAIGYRHFKDLKGRLQADLGDTAWLIGDRLRDFHARSLEGATELAHALEKEIAAVVAVYEVAATTDFARAVGRLTRCKEVYVAGFQTERGHAAQLVHNLQYLRPGVHLADLAGGHFAEILLADPKSTALVLIDGRRYSRLTQRLAMEAKAAGIGVTLITDPYCDWAHGNADEVFVVQTDLNSFWDTTSAMSSLVGLIVSGVFKELGAGVEERMVRISSLYNEFVGHTGIQRVSQKQD*