ggKbase home page

SCN18_30_10_14_R5_P_scaffold_1245_10

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(8558..12205)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037FC43F similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 1218.0
  • Bit_score: 1931
  • Evalue 0.0
Uncharacterized protein {ECO:0000313|EMBL:ACA21276.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 1217.0
  • Bit_score: 1579
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 1217.0
  • Bit_score: 1579
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3648
ATGGGGGAAGTAGAAAATTGCAGAGCGCAGCTCGAAACGTTGATCGCAGAGGCGAAGGCGTCGGGCGGGTCGGAGCTTGCCAACTACCAGCTGTTTGTCATCGGCCTGTGCGAGGCGCTTGGGTTGGGCCGCCCTGCCATGGCGCAGGAAGCCAACGAACTGAACGACTACGTGTTCGAGCGGCGCGTGGATTTCAAACACCCGGATGGCTCACGTACTGCAGGGCGCATCGACTGCTACAGACGTGGCGCGTTCATCCTCGAAGCCAAGCAGTCGGGAAAGCGCAAAGCGCGAAAACTCGATGCCGATCAGATGAACCTGCTGCCTGAAGATGCCTTGCAGCAGAAACCGGGGCAGGCCAAGCGCGGCACGCGCGGCTGGGATCAGGTCATGCTGGCGGCGCGCAAGCAGGCGGAAGACTATGCCCGCGCCTTGCCGGTCGAGCATGGTTATCCGCCGTTCCTGCTCGTGGTCGATGTCGGCCATGTGATCGAGGTCTATGCCGACTTCTCCGGCCAGGGCAAGAACTATGCGCATTTCCCTGATCGCCAGTCCTATCGCATCGGCATGGACGACCTGCTGGATGATAAGGTGCAGGCCCGCCTGCGCGCCATCTGGAATGATCCGCTGTCGCTCGACCCGACCCGCATCTCGGCGGAGGTGACACGCGACATCGCCGAACGCCTGGCCAGGATCGCCAAGCGGCTCGAAGGCAAGCACGACGCCAAGGACGTGGCGGAATTCCTGATGCGCTGCCTTTTCACCATGTTCGCGGAAGATGTGAAGCTCATTCCGGACAAGAGTTTCCATAAGCTGCTTGGACAGATGAAGGACACGCCCGAACATTTCGTGGCGGCACTGGAAAGCCTTTGGGCGGTGATGGATGGCGGCGGATACGCACCGCATCTCAACACGACCTTGAAGAAATTCAACGGCTCCCTGTTCAAGAAGCGGGCTGCACTTCCGCTCGATCGTGATGACATCAACGAATTGTGGATTGCAGCCGGCAAGGACTGGTCCGACGTCGAACCGGCCATCTTCGGCACATTGCTCGAGCGTGCACTTGATTCGCGCGAGCGGTCGAAACTCGGCGCGCATTACACCCCGCGCACCTATGTCGAGCGTCTTGTGGTGCCGACAATCATCGAGCCGCTGCGGGCCGACTGGGAACTGGCGCAAGTCGAGGTCAAGCAGCTTCGAGACAAGGGCGACAACGCTGGCGCCCTGAAAGTTGTGAAAGCCTATCACCACAAGCTGTGTACAACGCGGGTGCTCGATCCCGCCTGCGGCACCGGCAATTTCCTTTATGTCAGCCTCGAACTGATGAAGCGCCTCGAAGGCGAGGTGCTGGACGCGCTGGACGATCTTGGCGAGGACCAGGTGCGTTTCGCCATGGAAGGCGAGACGGTCAATCCGCGCCAGTTCTATGGCCTAGAACTCAATCAGCGCGCCGTACCGATCGCCGACCTTGTGTTGTGGATCGGCTACCTCAAATGGCAGCTCAAGACATCCGGGCTTGCCTCGATCACCGAGCCGGTGCTGCACGCCTATGGCACGATCAAGCAGCAGGACGCGGTGATTGCCTATGACCGCCAGGAACTGCTGCGCGATCAACATGGCAAGCCGTTGTCGCGCTGGGACGGCTTGACCAAGAAGCTGCATCCGATCACCGGCGAGGAAATTCCCGACCCTGATGCGCAGGTGCCTGTCTATACCTACGTCAACCCGAAGCGCGCGCCGTGGCCGGAAGTCGAGTTCATCGTCGGCAATCCGCCCTTTATCGGCGGCAAGGACATGCGATCCGAACTGGGCGATGGATATGCGGAATCCTGCTGGGCGGTACGTCCGCATGTTCCGGGTGGTGCCGATTTCGTCATGCATTTCTGGGACGAGGCGGCAACCCGGCTGCTGGAAAGGCCGGCCAAGGGTAAGGCCAACCCGCTCAGGCGTTTCGGCTTCATCACGACCAATTCGATCACGCAGACTTTTTCGCGCCGCGTGATCGAGCGCCACATGGCCGCCAAGGAGCCGCTGTCGCTGATCTTTGCCACCCCGAACCATCCATGGCTCAAGGCATCCGACAAGGCGGCCGTGCGCATCGCGATGACGGTTGCACAAACGGGCGAGCACGAGGGTGTGCTGGCTGAGGTCGTGTCAGAGGCTGGGCTGAATACGGATACGCCGCATATTGTTTTGGGCTCGCGGCAGGGAAGAGTTCGCGAAAACCTTACGCTTGGATCCGATCTGGCATCTGCAAAAGCCCTCTTGGCTAACGATCTTGTCTCAAGTCCCGGAGTGAAGCTTCACGGCGCGGGCTTCATCGTCACGCCCGCACAGGCCAAGGGACTTGGGCTGGGTACTATCGCTGGGCTGGACCAGCATATAATGCCCTACCGCAATGGCCGAGACATCGCCCAGCGTCCGCGTGGCGTCATGGTGATCGACCTCTATCCGCTCGATGTTGACAATGTTCGCACCCATTTTCCGTCTGTTTACCAGCATGTTCTCGACAACGTGAAGCCACAGCGAGATGCCAAAGTTGGTGCGTCGAAGGATATGGCCGAATATGCAAGGCAATGGTGGTTGTTCGGCAAGGTAAGAACAGAGTTGCGAGCCGCTCTGGATCACCTGCCGCGATACATTGCCACCGTCGAAACGACGAAGCACCGGACCTTTCAGTTTCTCGACGCCAGCATTCGACCTGACAACATGCTGGTTTGCATCGGCCTAGACACCGCAGAGCATCTGACGGTCCTCTCGTCGCGAATGAAAGTTACATGGGCATTGGCAACTGGCGGTTGGCTAGGGGTCGGAAATGATCCCCGCTACTCGAAGTCGCGCACCTTCGATCCGTTCCCATTCCCTCTTGCAGTCGATCCCACGCTTCCTGCCGCTGATCCGTTGCATGCCCAGCAAGATCGCCTGCGGGAACTCGGCGAACGCCTCGACAGTTTCCGTAAGGACCGGCTGGCCGAGCATTCATTCCTCACCATGACCGGCCTCTACAATGCTTTGGAGCGGCTGCGGGAACTGGAAAATGGTTGCGATGTGCCACCGCTCACGGACGCCGAGCGCGACGTCCATCAGGCCGGGCTGATCTCCGTTCTCAAGGAAATCCACGACGATATCGACCGAGCTGTGCTGGCGGCCTATGGCTGGGACGATCTGATTCTCGAACTGGTCGGCAAGCCGGGTGCGACCCTGCCATCGCCACATAAGAGCGAAGCACAGGAAAAGGCCGAAGAGGAACTTCTGACGCGGCTGGTCGCGCTAAACCAGGAGCGGGCGGCGGAGGAAAAGCGCGGTGTGGTGCGCTGGCTTCGCCCCGACTATCAGATACCGAAGCTTGGCGCGAAAGCTCCCAAGCCGGCCGACGAGCATGTCGGGTCTTTCGACATCGAATTGCCCGATGCCGACAAGCGGCCCAAATGGCCGACGGACGGGCTGGAGCAGATCAGGCTGGTGCGCGACATGCTCGCCAAGGCGCCGGCACCCTTGCCGCCTGATGGCATCGCCAGCGTCTTTGAAGGCAAGAACACGACCAAGCGCCGGGATCGTGTCGAGGAGGTTCTGGAAACACTGGTCGCAACCGGCCTTGCCCGCACGGGCGAGCTTGATGGCCAGCGCCGCTACTTCCTGCCCCGTTAG
PROTEIN sequence
Length: 1216
MGEVENCRAQLETLIAEAKASGGSELANYQLFVIGLCEALGLGRPAMAQEANELNDYVFERRVDFKHPDGSRTAGRIDCYRRGAFILEAKQSGKRKARKLDADQMNLLPEDALQQKPGQAKRGTRGWDQVMLAARKQAEDYARALPVEHGYPPFLLVVDVGHVIEVYADFSGQGKNYAHFPDRQSYRIGMDDLLDDKVQARLRAIWNDPLSLDPTRISAEVTRDIAERLARIAKRLEGKHDAKDVAEFLMRCLFTMFAEDVKLIPDKSFHKLLGQMKDTPEHFVAALESLWAVMDGGGYAPHLNTTLKKFNGSLFKKRAALPLDRDDINELWIAAGKDWSDVEPAIFGTLLERALDSRERSKLGAHYTPRTYVERLVVPTIIEPLRADWELAQVEVKQLRDKGDNAGALKVVKAYHHKLCTTRVLDPACGTGNFLYVSLELMKRLEGEVLDALDDLGEDQVRFAMEGETVNPRQFYGLELNQRAVPIADLVLWIGYLKWQLKTSGLASITEPVLHAYGTIKQQDAVIAYDRQELLRDQHGKPLSRWDGLTKKLHPITGEEIPDPDAQVPVYTYVNPKRAPWPEVEFIVGNPPFIGGKDMRSELGDGYAESCWAVRPHVPGGADFVMHFWDEAATRLLERPAKGKANPLRRFGFITTNSITQTFSRRVIERHMAAKEPLSLIFATPNHPWLKASDKAAVRIAMTVAQTGEHEGVLAEVVSEAGLNTDTPHIVLGSRQGRVRENLTLGSDLASAKALLANDLVSSPGVKLHGAGFIVTPAQAKGLGLGTIAGLDQHIMPYRNGRDIAQRPRGVMVIDLYPLDVDNVRTHFPSVYQHVLDNVKPQRDAKVGASKDMAEYARQWWLFGKVRTELRAALDHLPRYIATVETTKHRTFQFLDASIRPDNMLVCIGLDTAEHLTVLSSRMKVTWALATGGWLGVGNDPRYSKSRTFDPFPFPLAVDPTLPAADPLHAQQDRLRELGERLDSFRKDRLAEHSFLTMTGLYNALERLRELENGCDVPPLTDAERDVHQAGLISVLKEIHDDIDRAVLAAYGWDDLILELVGKPGATLPSPHKSEAQEKAEEELLTRLVALNQERAAEEKRGVVRWLRPDYQIPKLGAKAPKPADEHVGSFDIELPDADKRPKWPTDGLEQIRLVRDMLAKAPAPLPPDGIASVFEGKNTTKRRDRVEEVLETLVATGLARTGELDGQRRYFLPR*