ggKbase home page

SCN18_30_10_14_R5_P_scaffold_1011_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(578..2038)

Top 3 Functional Annotations

Value Algorithm Source
FAD-binding molybdopterin dehydrogenase n=1 Tax=Thalassospira lucentensis RepID=UPI0003B47D36 similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 483.0
  • Bit_score: 501
  • Evalue 6.50e-139
FAD-binding molybdopterin dehydrogenase {ECO:0000313|EMBL:KGM31849.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 490.0
  • Bit_score: 509
  • Evalue 4.40e-141
xdhA; xanthine dehydrogenase small subunit similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 491.0
  • Bit_score: 491
  • Evalue 2.50e-136

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1461
TTGCGTAACTCCATCCGTTTCCTGCTCGGCAGGGAGATGCGGGAACTCGCGAGCTTTCCACCAACGACCACCGTGCTCGACTATCTGCGCGGCACGGAACGGCGTTGCGGCACCAAGGAGGGCTGCGCCGAGGGCGATTGCGGCGCCTGCACGGTGGTGGTGGGCGAGTTGCAGGACGGCGCCATGCGCTACCGCGCGGTCAATTCCTGCATCCAGTTCCTCGGAACGCTGGACGGCAAACAACTCATCACTGTCGAGGATCTCGCCCAGGGCGGCGAGTTGCACCCGGTGCAGGAGGCCATCGCGACGTCGAACGGCTCGCAATGCGGCTTCTGCACGCCTGGCTTCGTCATGTCGCTGTTTTCGGCCTGGGCCCACGGCCAGCAGCTCACGCGCGTGGCGCTGGACGACACGCTGTCGGGCAATCTGTGCCGCTGCACCGGCTACGGCACCATCGTCGAGGCCGCATCCAGCTTGACCGGCCGCGACCGTAACGACCACTTTGCGCAGGACAGCGCCGTCACCGTGGAACGGCTCTCAGGTCTGGACGACGGGCAGGACGTGGCGATCGAGCAGGGCGGCATGCGGTTTTTCGCGCCTGCGACTACCGAAAAGTTGGCGCAGTTGCTTTTGGAGCATCCCGACGCGACCATCCTGGCCGGCGGCACCGACGTCGGCCTGTGGGTCACCAAGCAGCACCGCAAGCTGCCGGTCATCATCTCCGTGCTGGGCATCGAGGCGTTGCGAGCTACCACGCTTGCCGACGGCTTGCTCGCGTTCGGTGCCGGCGTCTCGCTGAATGCCGCTGCGCTCGCCCTGTCTCGGCACGTACCGGAGCTGGGCCTTTTGATGCGCCGCTTCGCCTCGGCGCAAATCCGCAACACAGGCACGCTGTGCGGCAACATCGCCAACGGCTCGCCGATTGGCGACCTGCCGCCGGCCCTCATCGCGCTTGGCGCCGAGATCGTCCTGCGCAAGGGCGAACGGCAGCGCGTGATTGCCTTGCAGGACTATTTCCTCGCCTACCAGAAGCAGGACCGCGAGCCCGGCGAATTCGTGGAGGCAGTCCGTGTTCCGCTGCCGCCTGCCGGTGCGCTGTTTCGCGTGCACAAGGTGTCGAAACGGCGCGACGAGGATATCTCTGCGGTCTGCGCCGCCCACTATGTCGAGGTCGAGGACGGTCGGGTAGCATCGGTGCGGCTGGCCTATGGCGGCATGGCCGCCACGCCGAAGCGTGCGACGGCCACCGAGCAGAGCCTGCTCGGTCAAGTCTGGGGCGAGCCGGCAATCCGCATGGCGCAGGATGCGATGGCGCAAGATTTTGCACCGATCAGCGACATGCGCGCCAGCGCAGCCTACCGCATGACGGTTGCAACCAATCTCTTGTGGCGCAGCTTCCTGGAGATGGGGGGAGCCGGCGACACGCAGATCCCTGACGAATGGTGTCTGGCCCATGCCTGA
PROTEIN sequence
Length: 487
LRNSIRFLLGREMRELASFPPTTTVLDYLRGTERRCGTKEGCAEGDCGACTVVVGELQDGAMRYRAVNSCIQFLGTLDGKQLITVEDLAQGGELHPVQEAIATSNGSQCGFCTPGFVMSLFSAWAHGQQLTRVALDDTLSGNLCRCTGYGTIVEAASSLTGRDRNDHFAQDSAVTVERLSGLDDGQDVAIEQGGMRFFAPATTEKLAQLLLEHPDATILAGGTDVGLWVTKQHRKLPVIISVLGIEALRATTLADGLLAFGAGVSLNAAALALSRHVPELGLLMRRFASAQIRNTGTLCGNIANGSPIGDLPPALIALGAEIVLRKGERQRVIALQDYFLAYQKQDREPGEFVEAVRVPLPPAGALFRVHKVSKRRDEDISAVCAAHYVEVEDGRVASVRLAYGGMAATPKRATATEQSLLGQVWGEPAIRMAQDAMAQDFAPISDMRASAAYRMTVATNLLWRSFLEMGGAGDTQIPDEWCLAHA*