ggKbase home page

SCN18_30_10_14_R5_P_scaffold_1011_5

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(4216..5409)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X7H9_OCHA4 similarity UNIREF
DB: UNIREF100
  • Identity: 38.2
  • Coverage: 390.0
  • Bit_score: 248
  • Evalue 8.10e-63
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 390.0
  • Bit_score: 248
  • Evalue 2.30e-63
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ABS17183.1}; Flags: Precursor;; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.2
  • Coverage: 390.0
  • Bit_score: 248
  • Evalue 1.10e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGAAGAACAGCACCGCATCCACAATCAAACGAGCCGGCATCGGACTTGCCGCAGCAACAGCCATGATGGCGTGGTCGCTCGCCGCCCACGCCGAGGACACCTACAAGATTGGCTGGGCGTCCGATAAATCCAATTACCTGTCCTTCGTCGACGAGCCGTTGGCCAAGGGCATGGAAGTCGCCATCGACGAGATCAACGCCAAGGGCGGTATCGGCGGCAAGATGAAGATCGAGCTCGACCGGCGCGACATGAAGTCGGACCCGATGCTCGGCGCCACCGTCGTCCAGGAACTGATCGCCGCCGGCGCCAAGTTCATCGTCACCACCTGCGACACCGACGTCTCGCTACCGGGCGCGCAGATGGCGGCAAAGGCCTCGCTGCCGGTGATGAGCAGTTGCGGCGCGGACGCCGCCGGGCCGAGCCAGGTGCCGGACGGCTACGGGTTCCTCAATGTGCCGGGCAGCCTGACGCAAGGCGCGTTCCTGGCCGAATACGCCGCCGCACAGGGCTACAAGAAGGCCTTCACGCTGAAGTCCAAGAGCGAGGGCTACACCCACACGCTCGCCAACGCCTTCGAGGAACGCTTCAAGGAACTCGGCGGCGAGATCGTCGGCCAGGCCTTCTACACGCTCGGCGACAGCTCCTATCGTGTCACCGCGACCAAGATGGTCGATTCCGATGCCGACGTCATCATGTCCAACGCCTTCCCGTCGGACAGCACGGCCTTCCTCAAGGACATGGAGCGGCTGGGCAACACCAAGCCGCTGCTTTTGGTCGATGGCAACGACACGCCGGTGATCTTCGACGCGGGCAAGCAACTCGCCCTGTCGGTGATGGCAACCTATGGCGGCGACCGTTCGCCTGGCTCGACCTTCTCGAAGTTCGAGGAGGAATATCGTGCGAAGTTCGGTGCCGATCCGGACTCGCTGCAGACCGCGCTCGGCTATGATCTGGTGATTGCCGTTGCCGCAGCAGTGGAAGCGGCTGGTAGCACGGACGGGCCTGCGGTTCGCGATGCGCTGCACAATCTGGACAACGTCCACGGCGCCACCGGCCTGATCACCTACAAGGACAGCCCGATCGGCAAGGGCATCCCGAAGAAGGACTACGCGCTGGTGAAGTTCGACCTCGACAACAAGAAGTTTATCACCCTGTCGACCGGCTTCCCGGAAAAGTTTCCTCCGGTGAAGTGA
PROTEIN sequence
Length: 398
MKNSTASTIKRAGIGLAAATAMMAWSLAAHAEDTYKIGWASDKSNYLSFVDEPLAKGMEVAIDEINAKGGIGGKMKIELDRRDMKSDPMLGATVVQELIAAGAKFIVTTCDTDVSLPGAQMAAKASLPVMSSCGADAAGPSQVPDGYGFLNVPGSLTQGAFLAEYAAAQGYKKAFTLKSKSEGYTHTLANAFEERFKELGGEIVGQAFYTLGDSSYRVTATKMVDSDADVIMSNAFPSDSTAFLKDMERLGNTKPLLLVDGNDTPVIFDAGKQLALSVMATYGGDRSPGSTFSKFEEEYRAKFGADPDSLQTALGYDLVIAVAAAVEAAGSTDGPAVRDALHNLDNVHGATGLITYKDSPIGKGIPKKDYALVKFDLDNKKFITLSTGFPEKFPPVK*