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SCN18_30_10_14_R5_P_scaffold_1065_8

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(7138..8418)

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter-DctM subunit n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LUI6_DINSH similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 421.0
  • Bit_score: 459
  • Evalue 3.30e-126
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KHJ53641.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 425.0
  • Bit_score: 596
  • Evalue 1.80e-167
TRAP dicarboxylate transporter, DctM subunit similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 421.0
  • Bit_score: 459
  • Evalue 9.20e-127

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1281
ATGCTCTCCCTAGCCCTTATCACAATTCTCACGCTTTGCGTGCTGGCGGTTATGGGCATGCCCATAATCATCGCCCTCGCCGCCTCGGTCATCGCTTTTCTGTTCTTCTCCAGCGGGTGGGAACTGGCACTGCCGCAACAGACTCTGGTCGGTGTCAGCGACTACATTCTCGTTACGCTTCCCCTATTCATCCTTGCCGGCAACATCATGAATGTCAGCGGCATTGCCGACAGGCTCTTCGCGTTCGCCAGCGCGGCAGTCGGCTGGATGCGCGGCGGCCTAGCTCATGTCGACGTGATGGTTTCCATCATGTTTGGCGGCATGATCGGAACCTCGGTCGCCGACTTGGCTGGAACCGGCTCGGTCATGATCCCGAAGCTGAAGAAGGCGGGGTATCCGGGTCCCTTTGCCTGTTCCATCACGGCCACGTCCTCGGGCATTGGCATCCTGATCCCGCCGAGTTCACCCATGATCCTCTACTCGGCCGTAACCGGCACTTCGCTCGGCGCCTTGTTCTTGGCCGGCGTTATCCCCGGTCTCCTCATGGGCCTCGTGCTGATGATCACGATCGGAATATTGGCGCGCCGCAATGGCTGGAGCCCGATGCAGAGTTTCGAATGGCGCGAACTTATGCGCACCGGCAAGGAAGCCATCCTGCCAATGGGCATGCCCGTCCTGATTCTCGGAGGGCTGGTATTTGGCATCTTCACGCCGTCCGAGGCCGGGGCATTCGCGGTCGCATACGCCATTATCCTCTCAATGGGCGTCTATCGATCCATGAGCTTTGTGGATCTGCGAAAGTCCCTGGTCGAAGCCACCGTGCTCACCGGCGAAGTCCTGCTCGTCGTAGGCTTTTCGGTGGCGCTCGGATGGGCTCTGTCTGCGGCGCGGGTTCCGGTGGCTCTTCTGGATATGATGCAGTACCTGTTCCCATTCGAGTCCACGATCCCGCAAATCTTCCTGATGCTGGGTTTGGCGCTCATCGCAGGCATGGTGCTCGACCCATTGATCCCGATGATCATGCCGGTGCTGCTGCCGTCGCTGCTGGCTCTCGATGTCGACCTGGTGCACTTCGGCGTCCTGATGGTGGTCACGGTGGTCATCGGACAGGTCACGCCGCCAGTGGCATTGGCGCTGATCGTGGCAGCCCGGATCGGACGGGAGGATATCGTAGCGACCTTCAGGGCGAACACGCCGCTGCTTCTGAGCATGTTTGTCCTGCTGATATTGCTCATCTTCTTCCCTGCCCTCACCACCTGGCTGCCCAGCCTGATGATGTAG
PROTEIN sequence
Length: 427
MLSLALITILTLCVLAVMGMPIIIALAASVIAFLFFSSGWELALPQQTLVGVSDYILVTLPLFILAGNIMNVSGIADRLFAFASAAVGWMRGGLAHVDVMVSIMFGGMIGTSVADLAGTGSVMIPKLKKAGYPGPFACSITATSSGIGILIPPSSPMILYSAVTGTSLGALFLAGVIPGLLMGLVLMITIGILARRNGWSPMQSFEWRELMRTGKEAILPMGMPVLILGGLVFGIFTPSEAGAFAVAYAIILSMGVYRSMSFVDLRKSLVEATVLTGEVLLVVGFSVALGWALSAARVPVALLDMMQYLFPFESTIPQIFLMLGLALIAGMVLDPLIPMIMPVLLPSLLALDVDLVHFGVLMVVTVVIGQVTPPVALALIVAARIGREDIVATFRANTPLLLSMFVLLILLIFFPALTTWLPSLMM*