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SCN18_30_10_14_R5_P_scaffold_1065_14

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 12340..13491

Top 3 Functional Annotations

Value Algorithm Source
Nickel/cobalt efflux system RcnA n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U5B5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 391.0
  • Bit_score: 583
  • Evalue 7.90e-164
Nickel/cobalt efflux system RcnA {ECO:0000313|EMBL:ENN85473.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 391.0
  • Bit_score: 583
  • Evalue 1.10e-163
high-affinity nickel-transporter similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 376.0
  • Bit_score: 495
  • Evalue 8.00e-138

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
ATGGCCTCGCTTCCTGAGCTCTTGCAGCAAGGAACTGCATACGCATGGCTTTTTATACCCACTGCGATTCTCTTGGGTGCTTTGCACGGCCTTGAGCCGGGCCACTCCAAGACAATGATGGCGGCTTTTATTATTGCCGTGCGGGGTACGATTGCCCAGGCGGTTCTGCTGGGCGTATCGGCCGCAATTTCACATACAGCAATTGTCTGGCTTGTCGCGCTCGGCGGCCAATACATCGGCCAAGGCTTGGATGCAGAAACGAGTGAACCGTATTTCCAGTTGGTTTCGGGGGTGATCGTTGTCGGTATCGCGGCATGGATGATCTGGCGCACATGGCGCAGCCAGGTTCTGGAAGCTGGCCACGACCACCATCATCACCACGAGGGCGAGGGGCAAAAGGTCGATACAGGGCACGGTGTACTTACGTTGAACATCTTCGAAGACGGTGCGCCACCCAGGTTTCGGATCCATGTTCAAAGCGGACACCGCTGGGCGGCGAAAGACGCGACCCTGGTAACCGAGCGAACCAACGGTTCACGGCAGGCGTTTACCTTCGTCGACAAGGGCGAATATCTCGAAAGCTTGCAGGAGATTGCGGAGCCGCATGATTTCAAGGCGCGGATCAGTCTCGGTCATGGAAGCCACACCCATGACTACGATGTTCATTTCAGCGAGGTTGGCCACACTCACGGTCTCGAGGTCGGCAAGGACGGCGACTACATGGATGCGCACGAGCGCGCCCACGCCAGCGACATCGCGCGCCGGTTCTCCAATCGCAACGTAACCACGGGCCAGATCGTCATGTTCGGATTGACGGGCGGGCTTATTCCTTGCCCCGCTGCCATAACGGTCCTGTTGCTTTGTCTTCAGCTCAAGCAACTTTCGTTGGGTGCCGTTCTGGTGTTGTGCTTCAGCATCGGATTGGCTGTCACAATGGTAGCAGCGGGAGTGCTTGCCTCGTTGAGCGTTCGCCATATTCAAAAACGCTGGTCTGGCTTCAGCACCTTCGCACGCCGCGCGCCCTACGCATCAGGCGTCCTCATGCTGTTGATCGGGGTCTACATGGGCGTTATCGGCATCAACGGCCTGCGTCACGGCCATGCCGATGTTGCGACTGCGGCCTTCACCTATGAGATCGCGGTTTCAAACTGA
PROTEIN sequence
Length: 384
MASLPELLQQGTAYAWLFIPTAILLGALHGLEPGHSKTMMAAFIIAVRGTIAQAVLLGVSAAISHTAIVWLVALGGQYIGQGLDAETSEPYFQLVSGVIVVGIAAWMIWRTWRSQVLEAGHDHHHHHEGEGQKVDTGHGVLTLNIFEDGAPPRFRIHVQSGHRWAAKDATLVTERTNGSRQAFTFVDKGEYLESLQEIAEPHDFKARISLGHGSHTHDYDVHFSEVGHTHGLEVGKDGDYMDAHERAHASDIARRFSNRNVTTGQIVMFGLTGGLIPCPAAITVLLLCLQLKQLSLGAVLVLCFSIGLAVTMVAAGVLASLSVRHIQKRWSGFSTFARRAPYASGVLMLLIGVYMGVIGINGLRHGHADVATAAFTYEIAVSN*