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SCN18_30_10_14_R5_P_scaffold_1396_6

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(4503..5819)

Top 3 Functional Annotations

Value Algorithm Source
Xylose transport permease protein xylH n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YDY8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 443.0
  • Bit_score: 742
  • Evalue 2.00e-211
Sugar ABC transporter permease {ECO:0000313|EMBL:EZQ14473.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 438.0
  • Bit_score: 771
  • Evalue 5.60e-220
inner-membrane translocator similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 438.0
  • Bit_score: 741
  • Evalue 1.20e-211

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1317
ATGAGTGACGCGACCTCTGCAACGACGGTCGACCGGGCGCGCGAGGCTGAACTCGGCCCCGTCGCCCGCTTCCTGAAAGCGACAGAACTCGACACCCGCATGCTGGGCATGGTCGCGGCGCTGATCCTGATCTGGATCGTGCTGCACTTCCTGTCCGGCGGGTTGTTCCTGACACCACGCAACCTGTGGAACCTGTCGGTCCAGACCTCGTCGGTCGCGATCATGGCGACCGGCATGGTGCTGGTCATCGTCATGCGCAACATCGATCTGTCGGTGGGTTCGCTCGAAGGCGTCATCGGCATGATCATGGGCGTGCTTCAGGCCCAGATACTCATTCGCGTCGTCGGATTTCCAGCCGGAGACCCGTGGATATGGATCATCGCGCTTGCCTGCGGCATAGCCTTCGGCCTGCTGATCGGGGCGTTCCAGGGCTTCATCATCGCCTATCTGGAAGTGCCGTCCTTTATCGTTACGCTCGGCGGCCTTTTGGTCTGGCGCGGCGCGGCATGGTGGGTGACCAGCGGCCAGACGGTCGCGCCGCTCGATGCAACGTTCCAACTCATGGGCGGTGGTCCAAACGGTTCCATCGGCGCGACGTGGAGTTGGATCATCGGCATTGTCGCATGTCTGGCGGTGATCTTCATGCTGCTCAATGGACGCACACAGCGCAAGCGCTTCCGCTTCCCGCTGCGGCCGGTCTGGGCCGAGGTGTTTCTCGGCGCTGTTGCCTGCGCCGTCATTTTGGGCGCCATACAGGTCGCTAATTCCTATCCGTGGCCGGTCGGCATCGTGAAGCGCTATGCGGAAGCGAACGGTATAACCATTCCCGAAGGTGGGCTGTTCATTGCCCACGGCATTGCCATTCCTGTTTTGATGGCGGTTACGGTCGGCATCGTCATGACCTTCGTTACCAACCGGACGCGCTTCGGACGCTACGTTTTCGCCATCGGCGGCAACCCTGAGGCGGCCAACCTTGCCGGTATCAACACCCGCTGGGTGACGATGAAGGTGTTCATGATCATGGGTGCGCTGGTGGCGATCAGCGCAGCGATCTCGTCGGCTCGCCTCAACGCTTCCACCAATGCGCTCGGCACGCTGGACGAACTTCTGGTCATCGCGGCGGCGGTTATCGGCGGCACGTCGCTTGCCGGCGGCGCAGGCACCGTTGTCGGCGCGATGCTGGGTGCGCTTTTGATGCAGTCACTGCAGTCCGGCATGGTGCTGCTCGGCGTCGATTCACCATTGCAGAGCATCGTCGTCGGTGCGGTTCTGGTCGTCGCGGTGTGGCTCGACACCGTCTATCGCAAGCGGGTTTAG
PROTEIN sequence
Length: 439
MSDATSATTVDRAREAELGPVARFLKATELDTRMLGMVAALILIWIVLHFLSGGLFLTPRNLWNLSVQTSSVAIMATGMVLVIVMRNIDLSVGSLEGVIGMIMGVLQAQILIRVVGFPAGDPWIWIIALACGIAFGLLIGAFQGFIIAYLEVPSFIVTLGGLLVWRGAAWWVTSGQTVAPLDATFQLMGGGPNGSIGATWSWIIGIVACLAVIFMLLNGRTQRKRFRFPLRPVWAEVFLGAVACAVILGAIQVANSYPWPVGIVKRYAEANGITIPEGGLFIAHGIAIPVLMAVTVGIVMTFVTNRTRFGRYVFAIGGNPEAANLAGINTRWVTMKVFMIMGALVAISAAISSARLNASTNALGTLDELLVIAAAVIGGTSLAGGAGTVVGAMLGALLMQSLQSGMVLLGVDSPLQSIVVGAVLVVAVWLDTVYRKRV*