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SCN18_30_10_14_R5_P_scaffold_1403_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 1..2211

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane adhesin like proteiin (Fragment) n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F102_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 614.0
  • Bit_score: 407
  • Evalue 1.90e-110
Outer membrane adhesin like proteiin {ECO:0000313|EMBL:EHS53634.1}; Flags: Fragment;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 614.0
  • Bit_score: 407
  • Evalue 2.70e-110
type 1 secretion C-terminal target domain (VC_A0849 subclass) similarity KEGG
DB: KEGG
  • Identity: 35.5
  • Coverage: 560.0
  • Bit_score: 268
  • Evalue 4.00e-69

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2211
CTTTTGACGATTGCGTCTGACGGGACGTGGACGTTTGCACCGGCGAACGGTCTGGACAACAGCGTAGCCCAACAGGTGAGCTTCACGCTGAAGGGCGTCGACGCCGATGGCGACGAGACGAGCGACAGCCACACGATTGCGATCACCGATGGCGATGGCCCGACGGTGAGCAGCCCGCAGGGCGGGACGATCACGCTTGGTCTTGACGACCAGAACCTTGCCGACGGCAGCACGCCGGCTGGCGACGACTTCGACACCGATACGATCAGCTTTGCGCCGGGTTCGGATGCGATCGCGTCGATTGCGTTCGGCCAGGACATCTCCGGACTTGCCGGCGGCCTGACCTGGGTGCGCGTCTCGGACACGCAGATTGTCGGCCGCGACGGGGCGACGGACATCGTGCGGCTTGACCTCGTGCGCAACGGCAACGATGCGCAGGTGACGGCGACGCTCCTGAACAACTACGACAGCCATCCGGCCTTCACGGCGGACGACCTTGTCCAGCTTGGCTCGGTCAAGGTGGTTGCCACCGACACCGACGGCGATGCGGCCGAAGGCACGGTCAATGTCAGCGTCTCCGACGACGTTCCGCTTGTGACGATCGGAGGCAATGACAACGGAACGCCGACCTCGAGCAACGTGAACGAGGGCACTACAGCGACAGGCAACTGGACATTGACGCCGGGTGCCGACGGTGTTGCGGCAGGCCAACTCACGATCACTGCCGACGGAAGCAGCCACACGATCGTGTGGACGGCGGGCAAGTTTGAGTTCGATGTTCCCGGCAAGGGAACGATGACGCTGTTCCAGCCGGACGCCAATGGCAACGGAAGCTGGAGCTTCGCCGCCAACCAGGTTTCGACCACTGGTGTGAACGTAAGCTTCACCATCAAGGCGGTTGATGGCGACGGGGATCAGGACACCGACTCCCACGTCATCAACATCGTCGACGTCAATCAGCCGCTCGTCATCGGTGGTGCGATAAGCGGCGTAGTCGAGGAAGAACATGGCTTGCCGGGCGGGCTTGAGGACGTCAATGACGTCCAAGGCCTGGATACCGATGAAAGCGGATTTGGCTCGGTTACCAACCAGGTTACGGGCAGCTTCGCTGATGCAATCGTGGGCGGCATCGATGGCGACCTGACCTTCAATTTCGCAGCGCTATCAGGAAATCCGGCGGTCGTTCGTACGGACGGCCAGGCCCTGACCTCGGGCGGCCAACCGGTCCTGTTTGCAATGGATGGCGGCAACCTCATTGGTTACGTCAACAACGGCGGTTCGAGCGGTTACCAGAACGGCACCGACACAAAGGTGTTCACGCTGACGCTCGATCATGACACAGGCAACTACACCTTCACGCTGAATGCCAAGGTTGACCACCATCCGGTCAACAGCGCCGATGATGTGGAAAACATCATCGCCATCAACCTCAATGGCCGTGTAACGGTCAGCGACGACGGCGGCCCGGCAGCTGATACCGACGTGCCTCTCGACGCATCGATCACCGTGATCGACGATATCCCGGTCGGCACGAATATGGCGGTCGATGCGCAGGCCGGCGTGCGCCCAAGTGTCAACATCGTGCTGATGATCGACACGTCCGGCAGCATGGGCAGCGGCAGCGGATCACGCATGGAGCTTGCCAAGGCAGCGGCGATCAACCTGTTGAACAACCCCGACGTCGATTCCAACCAGATCATGGTTGTCAATTTCGGATCTTCCGCGTCGATAAACACGGAAACTGGAGCTATGATGCAGCCCTCAATCTGGTTCGCAATAGCTGGGGATCGGGACCGACCGACGCGACCAAGACCATCTCGTATTTCATTTCGGATGGTGCGCCTAATCCTGCGAGCAGCGGCATCGACTCGGGCGAGCAGCAGGTGTGGGAAACCTTCCTGGACGGCAAGGTTGACGTGTCCTATGCCATCGGCGTGGGCAACGGCGTCAATACAACCAACCTGGATCCTGTATCCTGGGCGCCGGAAGACGCGAACCTGCCGCCAGTGCTTATCAACAACGCTTCCGAACTCAACGTACTGCTTACGGGCTCGCTCCCCGGCAATCCGAGTGGCAACATTTTCGACAATGGTGGCGGTTTCGGTGCCGACGGCGGTCATGTGCAGTCGGTCGAGTACAATGGGCATACCTATACCTTTGACGGTACGCACCCACAGGTCGTCATTACTGACGCGCTCGGCGGCAAATTGA
PROTEIN sequence
Length: 737
LLTIASDGTWTFAPANGLDNSVAQQVSFTLKGVDADGDETSDSHTIAITDGDGPTVSSPQGGTITLGLDDQNLADGSTPAGDDFDTDTISFAPGSDAIASIAFGQDISGLAGGLTWVRVSDTQIVGRDGATDIVRLDLVRNGNDAQVTATLLNNYDSHPAFTADDLVQLGSVKVVATDTDGDAAEGTVNVSVSDDVPLVTIGGNDNGTPTSSNVNEGTTATGNWTLTPGADGVAAGQLTITADGSSHTIVWTAGKFEFDVPGKGTMTLFQPDANGNGSWSFAANQVSTTGVNVSFTIKAVDGDGDQDTDSHVINIVDVNQPLVIGGAISGVVEEEHGLPGGLEDVNDVQGLDTDESGFGSVTNQVTGSFADAIVGGIDGDLTFNFAALSGNPAVVRTDGQALTSGGQPVLFAMDGGNLIGYVNNGGSSGYQNGTDTKVFTLTLDHDTGNYTFTLNAKVDHHPVNSADDVENIIAINLNGRVTVSDDGGPAADTDVPLDASITVIDDIPVGTNMAVDAQAGVRPSVNIVLMIDTSGSMGSGSGSRMELAKAAAINLLNNPDVDSNQIMVVNFGSSASINTETGAMMQPSIWFAIAGDRDRPTRPRPSRISFRMVRLILRAAASTRASSRCGKPSWTARLTCPMPSAWATASIQPTWILYPGRRKTRTCRQCLSTTLPNSTYCLRARSPAIRVATFSTMVAVSVPTAVMCSRSSTMGIPIPLTVRTHRSSLLTRSAAN*