ggKbase home page

SCN18_30_10_14_R5_P_scaffold_1436_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 1454..2260

Top 3 Functional Annotations

Value Algorithm Source
Phosphatidylcholine synthase {ECO:0000256|PIRNR:PIRNR000851}; Short=PC synthase {ECO:0000256|PIRNR:PIRNR000851};; Short=PCS {ECO:0000256|PIRNR:PIRNR000851};; EC=2.7.8.24 {ECO:0000256|PIRNR:PIRNR000851};; CDP-diglyceride-choline O-phosphatidyltransferase {ECO:0000256|PIRNR:PIRNR000851}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 268.0
  • Bit_score: 500
  • Evalue 8.60e-139
phosphatidylcholine synthase n=1 Tax=Rhizobium loti RepID=UPI000370C0D8 similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 263.0
  • Bit_score: 482
  • Evalue 1.70e-133
phosphatidylcholine synthase similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 268.0
  • Bit_score: 480
  • Evalue 1.90e-133

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
GTGAAAAAGAGTGTAACTGGCAAGAAAATCCGGGATCGTATCCCGCGACCCAAGAAAAAGGTGACATGGCCGCAGGCGCGCGCCTTTTCGGTTCACCTGCTTACCGCATCGGGCTCTTTCCTCGCATTCGTATCGCTGGTGGCAGCGAGCGAGGAACGATGGACGGCGATGTTCTGGTGGTTGGGACTTGCCCTGTTCGTCGATGGCATCGACGGGCCGATTGCACGAAAGCTCGAGGTCAAGGAAATCCTGCCGACCTGGTCGGGCGAACTGCTCGACAACATCATCGACTACGTCACCTACGTGCTGATCCCGGCCTTCGCGCTCTATCAATTCGGCTTGATGGGCGAGGGGCTTTCATTCCTTTCAGCCGCGATCATCGTGGTTTCCAGCGCGATCTACTACGCGGACACCGGCATGAAGACGAAGGAGAACTTCTTCAAGGGCTTCCCCGTCGTCTGGAACATGGTGGTGTTCACGCTGTTCGTCGTCGGGCCGGGCGAATGGGTTTCGTTCGCGGTGGTCGTCGTCGCCGGGCTGCTAACCTTCGTGCCAATCAATTTCCTGCATCCGGTGAGGGTGAAACGCCTGCGCCCGATCAATCTGACCGTCACACTGTTGTGGTGTGCCTTTGGAGCGCTGGCTCTCGCTGAATCTGCCCTGGCCCAATTTTACAGCCAGATCGGTGTGCTTGCCAAAAATGTCAGCCAGTTCACGAAGATAGGCATCACCATCACCGGTCTCTACCTGTTCTGCATCGGTGGTGTGATGCAATTTTTCCCCAATCTCGGTGCCAAGAAAGCCTGA
PROTEIN sequence
Length: 269
VKKSVTGKKIRDRIPRPKKKVTWPQARAFSVHLLTASGSFLAFVSLVAASEERWTAMFWWLGLALFVDGIDGPIARKLEVKEILPTWSGELLDNIIDYVTYVLIPAFALYQFGLMGEGLSFLSAAIIVVSSAIYYADTGMKTKENFFKGFPVVWNMVVFTLFVVGPGEWVSFAVVVVAGLLTFVPINFLHPVRVKRLRPINLTVTLLWCAFGALALAESALAQFYSQIGVLAKNVSQFTKIGITITGLYLFCIGGVMQFFPNLGAKKA*