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SCN18_30_10_14_R5_P_scaffold_1626_11

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(8698..9381)

Top 3 Functional Annotations

Value Algorithm Source
opuAA; glycine betaine/proline ABC transporter, ATP-binding protein (EC:3.6.3.32) similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 227.0
  • Bit_score: 252
  • Evalue 7.00e-65
Glycine betaine/proline ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AAV97366.1}; EC=3.6.3.32 {ECO:0000313|EMBL:AAV97366.1};; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 227.0
  • Bit_score: 252
  • Evalue 3.50e-64
Glycine betaine/proline ABC transporter, ATP-binding protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LKZ7_RUEPO similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 227.0
  • Bit_score: 252
  • Evalue 2.50e-64

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
GTCCGCGACAACGTCGCTTTCGGTATGGAAGTGCGCAAGATCAAGCGCGCCGAAAGACTGGCCATCGCGCAGGAAAAGCTCGAACTGGTCCATCTTGGGCAGTGGGCGGACCGATACCCGTCAGAGCTGTCAGGCGGCATGCAGCAACGCGTCGGCCTCGCCCGAGCGCTCGCCACTGATCCCGAACTGATACTGATGGACGAGCCCTTCAGTGCGCTTGATCCGTTGATCCGGCGTCAACTCCAGGACGAATTTCTTCGCATCTGGAAGACGCTGAACAAGACAGCCCTTTTCATCACGCACGACCTTGACGAAGCAATTCGCATCGGAGATCGCATCGCCATCATGAAGGAGGGGCGGTTCGTCCAGATCGGCACGCCTGAGGAGATCGTGACGAATCCGAAAGACGATTATGTCCGCGATTTCGTCCACGGCATCTCGAAACTGAAGTTCATCAGGGCGCATTCCCTGATGTGCGGAATAGATCAGTATCGCGGCACCCACGGCCGCCGAGGCGCGAACCTCGAACGCTATTCGAGCGTTACGGAAAACACTGACCTCGATAGTCTTATCAAGTTGAAGGTGAACGCTTCGAATTACGACCCTATCGTGGTAGTCGATTCGGCGAGCAGCCCTATCGGGGTAATCACAGTCACGGATTTGCTCAACGGCATGCGTTCATGA
PROTEIN sequence
Length: 228
VRDNVAFGMEVRKIKRAERLAIAQEKLELVHLGQWADRYPSELSGGMQQRVGLARALATDPELILMDEPFSALDPLIRRQLQDEFLRIWKTLNKTALFITHDLDEAIRIGDRIAIMKEGRFVQIGTPEEIVTNPKDDYVRDFVHGISKLKFIRAHSLMCGIDQYRGTHGRRGANLERYSSVTENTDLDSLIKLKVNASNYDPIVVVDSASSPIGVITVTDLLNGMRS*