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SCN18_30_10_14_R5_P_scaffold_2422_3

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(1352..1915)

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F544 similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 184.0
  • Bit_score: 295
  • Evalue 3.60e-77
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:KGJ06617.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 184.0
  • Bit_score: 299
  • Evalue 2.70e-78
dTDP-4-dehydrorhamnose 3,5-epimerase similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 184.0
  • Bit_score: 288
  • Evalue 1.20e-75

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
TTGATAGTTGAAAAGACGCCGATAGACGGATTGCTGTTGCTTACCCCGCGGCGGTTTGCCGACGAACGTGGCTTCTTCAGCGAGAGCTGGAACAGGCGGACTTTGCGCGAGAATGGCGTGGATTTGCCGGAGTTTGTTCAGGACAATCATTCCCTGTCCAATCGCGCCGGCACCTTGCGCGGACTTCACTTCCAGTCCCCTCCACATGCCCAGGGCAAGTTGGTGCGCTGCGGGCGCGGCAGCCTGTTCGATGTGGCAGTGGACATCAGGCGTGGAAGCCGGACGTTCGGACAATGGTTCGGAGCGGAGTTGAGCTTCGACAATGGCCGGCAGCTATGGATCCCGGCGGGATTTCTTCATGGCTTCGTCACGCGCGAGGACAACACCGAAGTCGTCTACAAGTGTACCGACCACTATGCGCCGGAATGTGATGGTACAGTGCTTTGGAACAGCGCCGGTATTGACTGGGGGCTATCAAACCCGCCGATATTGTCCCAGAAGGACGAAGCGGCTCAACCCTTGTCCACCTTTGCAAGCCCATTTGAATTGGAGAAAAGCCAATGA
PROTEIN sequence
Length: 188
LIVEKTPIDGLLLLTPRRFADERGFFSESWNRRTLRENGVDLPEFVQDNHSLSNRAGTLRGLHFQSPPHAQGKLVRCGRGSLFDVAVDIRRGSRTFGQWFGAELSFDNGRQLWIPAGFLHGFVTREDNTEVVYKCTDHYAPECDGTVLWNSAGIDWGLSNPPILSQKDEAAQPLSTFASPFELEKSQ*