ggKbase home page

SCN18_30_10_14_R5_P_scaffold_2506_4

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(3039..4199)

Top 3 Functional Annotations

Value Algorithm Source
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 357.0
  • Bit_score: 466
  • Evalue 2.00e-128
spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Aquaspirillum serpens RepID=UPI0003B4EA22 similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 375.0
  • Bit_score: 467
  • Evalue 8.30e-129
polyamine/opine ABC transporter ATPase similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 361.0
  • Bit_score: 461
  • Evalue 1.70e-127

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1161
TTGACAGTCAAAAAACAGCCAGCGCCCGATAGGGATGCGTCTCACTCAGCTGCCGATGCCGTGGTCAGGTTTATCAACGTCCAGAAGACTTATGACGCTGAGCGGCTGGTGGTGCGCAATCTCAACCTCGATATTCGGCGCGGCGAATTCCTCACCATGCTTGGGCCGTCCGGGTCTGGCAAGACAACGACGTTGATGATGCTAGCCGGCTTCGAGCCGGCAACACACGGCGAGATCCTGCTCAATGGACGGCAGATCAACCGCGTGCCGCCGGACAAGCGCGGCATCGGCATGGTCTTCCAGAACTACGCGCTGTTCCCGCACATGACAGTTGCCGAAAACCTGGCCTTTCCGCTGCAGGTCCGATCTGTCGGCAAGGCGGAAGTCGAACGGCGCGTTCTTGATGCGCTTGCCATGGTCGAACTGTCGGGCTTTGGGACGCGGCGTCCCGCTCAACTGTCGGGCGGCCAGCAGCAACGGGTGGCCGTCGCCCGCGCCCTGATCTTCGAGCCCGAAGTCGTCTTGATGGACGAACCGTTGGGCGCGCTGGACAAACAACTGCGCGAGCAGATGCAGTATGAGATCAAGCGCCTGCACGAACGTCTCGGCGTTACCATCGTCTATGTCACGCACGATCAAAGTGAAGCGCTCACGATGTCGGACCGGATCGCCGTATTCAACGACGGGGTAATCCAGCAGCTTTCGACACCTGCGGACCTCTATGAGCAGCCGACGTCGCTGTTCGTTGCCGAATTCATCGGTGAGAACAACCGGCTTGGCGGCAAGCTTGAGCACGTGGACTCTGCCGGCAAATGCACCGTAAGGCTGGACGGTGGACAGATTGTCAGCGCGATTGCCGTGGGAAATCCGAAACCCGGCCAGGCTGTGCAGCTTTCGCTGCGGCCCGAGCGGGTGTTGCTCAATCCGAACAGGTCGGACACGTCTCTGTCGATCGTGGAGGCGAGCGTCGACGACCTGATCTACCTCGGCGACCACATCCGCATTCGGCTGCTGGTTGACGGCCAGGAACCGTTCGTGATCAAGGCTCTGAACGACGACAACGGCATGTCGGCCCGCAAGGGCGATAAGGTTGCCGTCGGCTGGCGAGCTGAAAACTGCCGCGCCCTTCATCAGTCGCAAAGCGACGTTGGACATGGGTGA
PROTEIN sequence
Length: 387
LTVKKQPAPDRDASHSAADAVVRFINVQKTYDAERLVVRNLNLDIRRGEFLTMLGPSGSGKTTTLMMLAGFEPATHGEILLNGRQINRVPPDKRGIGMVFQNYALFPHMTVAENLAFPLQVRSVGKAEVERRVLDALAMVELSGFGTRRPAQLSGGQQQRVAVARALIFEPEVVLMDEPLGALDKQLREQMQYEIKRLHERLGVTIVYVTHDQSEALTMSDRIAVFNDGVIQQLSTPADLYEQPTSLFVAEFIGENNRLGGKLEHVDSAGKCTVRLDGGQIVSAIAVGNPKPGQAVQLSLRPERVLLNPNRSDTSLSIVEASVDDLIYLGDHIRIRLLVDGQEPFVIKALNDDNGMSARKGDKVAVGWRAENCRALHQSQSDVGHG*