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SCN18_30_10_14_R5_P_scaffold_2516_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 530..2341

Top 3 Functional Annotations

Value Algorithm Source
two-component sensor histidine kinase (EC:2.7.13.3) similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 603.0
  • Bit_score: 793
  • Evalue 2.20e-227
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 603.0
  • Bit_score: 793
  • Evalue 1.10e-226
C4-dicarboxylate transport sensor protein DctB n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X1E7_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 603.0
  • Bit_score: 793
  • Evalue 7.90e-227

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1812
ATGCTGCTCGTGCTTGGATTTGCGGTAGTCGCCACGGTAGTCGCCGTGTTCGGCAACGCCTTTGCCACGCGCGCCTACCTCGATCAGGCTGCGACGCGCGGCGAAACGACCTTGCGGCTGGCCGTTGCGGCACTGACCGGCCATATGAGCCGCTTCGAACCATTGCCCGCGCTGATCGCGGATCACGACGACATCGTGGCGCTGGTCGCCGATCCGGACAATGCCTCGCTGCGCATCCGCGCCAACGCATATCTGAAGGAAATCAACCACCTCCTAAAATCCTCGGATATCTACGTGATGCTGATCGGCGGCGATACGATCGCGGCCAGCAACTACGACGCGCCGCTGAGCTTCGTCGGCCAGAATTTCAGCTACCGGCCCTACTATCAGGATGCTGCGGAAGGCAGGCAGGGGCGCTTTTTCGCGCTCGGCACCACATCGCTTAAGCGAGGATACTATTTTTCCGCGCCAGTCTATGTCGGCGGTGAAATTCGCGGCGTCGTCGTCTTCAAGGTCGATATCGAGCCAATCGAAGCATCGTGGAAATCCGACGAGTACGAGATCGTCGTTACCGATCCGGAAGGCATCATATTCATGTCGGGTCGGCCGGAATGGCTCTACGCCGGCCTCCTGCCGCTTACCCAAGAGCGGCTGGACCGAACCGCCGCCTCCCGCCGCTACGCCAATGCGACGTTGCGCGAGTTGCCCGTGCGTGCCGGTCTTCAGGGCGCGCACCGGATGATGAACCTCAAGGCCGACAAGTCAGAACGGGAATACCTTGTCGTCGAAGAGCCGATGTCGGATGCCGGCTGGACCGTCAGCGTGCTTCTCGACACGAGTTCCGCACGCTCGCAAGCCCTCACCAGCGTACTTGCCGCGCTGCTCCTGCTCGGTCTTGCCGGTCTGCTGGGCGCCGTCGTCCTGCAACGCCGAGCGCGCCTTGCTGAACGCATGGGAATGCAGCGTACGGCGCGGGAAGAGCTGGAGCATCGCGTTGAGGAGCGGACGGCCGACCTCGCATCAGTGAATAGCCTGCTCGAACTTGAGGTCGCGGAACGGCGCGCCACGGAAGTGCAACTTCGCCAGACACAGGCGGACCTGATCCAGGCCGGAAAACTCGCAGCGCTCGGCCAAATGTCGGCAGCGCTGTCGCATGAGTTCAACCAGCCGCTGGCAGCGGTGAAGACTTATGCCGACAATGCCGCGATCCTGATCGACCGCAAGCGAACCAGCGAGGCGCGCGACAATGTCGCCCGCATCCTTGCGCTGACTGATCGCATGGCCTCGATAAGCCGGCATTTGCGGAATTTCGCCCGCAAACCCAATGAGCGGTTGGGACCGGTCGAACTCGACGAAGTCGTTCGCGACACACTGGAAATCGTTGCATGGCGGCTCAAGGCGGCGGATGCGGACGTCAAGATCGATCTGGGCAAGGAGCCTCCAATCGTCCGCGCAGGCAGCGTCCGTCTTCAACAGGTGCTCGTCAACATCCTCTCGAATGCGGCCGATGCGGTTGAGGGTTTGGAAAACCGAACCATCGAGCTGACTGCCCGCCGGATTGGCGAAAGCGTCGAGATCATCGTTCGCGATCATGGTCCGGGCGTGCCGGACGCCATAGCGTCGCGAATCTTCGACCCGTTCTTCTCAACCAAGGGCGTTGGCAAGGGCCTGGGTCTGGGGTTGTCGATTTCCTACAACATTATCAAGGATTTCGGGGGCAATCTTTCCGTTCAAAACCACCCTGACGGTGGAGCGGTATTCCGCATTGAGCTGGCCGCAATGAAAGCCATCGCCTCCGAGGCTGCGGAATGA
PROTEIN sequence
Length: 604
MLLVLGFAVVATVVAVFGNAFATRAYLDQAATRGETTLRLAVAALTGHMSRFEPLPALIADHDDIVALVADPDNASLRIRANAYLKEINHLLKSSDIYVMLIGGDTIAASNYDAPLSFVGQNFSYRPYYQDAAEGRQGRFFALGTTSLKRGYYFSAPVYVGGEIRGVVVFKVDIEPIEASWKSDEYEIVVTDPEGIIFMSGRPEWLYAGLLPLTQERLDRTAASRRYANATLRELPVRAGLQGAHRMMNLKADKSEREYLVVEEPMSDAGWTVSVLLDTSSARSQALTSVLAALLLLGLAGLLGAVVLQRRARLAERMGMQRTAREELEHRVEERTADLASVNSLLELEVAERRATEVQLRQTQADLIQAGKLAALGQMSAALSHEFNQPLAAVKTYADNAAILIDRKRTSEARDNVARILALTDRMASISRHLRNFARKPNERLGPVELDEVVRDTLEIVAWRLKAADADVKIDLGKEPPIVRAGSVRLQQVLVNILSNAADAVEGLENRTIELTARRIGESVEIIVRDHGPGVPDAIASRIFDPFFSTKGVGKGLGLGLSISYNIIKDFGGNLSVQNHPDGGAVFRIELAAMKAIASEAAE*