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SCN18_30_10_14_R5_P_scaffold_2521_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(1..1677)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 559.0
  • Bit_score: 1074
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KRG4_MESAW similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 559.0
  • Bit_score: 1071
  • Evalue 0.0
DNA-directed RNA polymerase, beta subunit similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 559.0
  • Bit_score: 1071
  • Evalue 0.0

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1677
ATGGCCCAGACCCAGACTTTCAATGGCCGCAGACGCGTAAGAAAGTTCTTCGGAAAGATCCCCGAAGTTGCCGAGATGCCGAACCTCATCGAGGTTCAAAAGGCATCCTACGATCAGTTCCTGATGGTCGACGAGCCGCAAGGCGGTCGCCCGGACGAAGGCCTGCAGGCTGTTTTCAGGTCTGTGTTCCCGATCTCCGATTTTTCCGGAGCGTCGATGCTGGAATTCGTCAAGTACGAGTTCGAAGCACCGAAGTTCGACGTCGACGAGTGCCGCCAGCGCGACCTGACCTATGCGGCACCTCTCAAGGTGACGCTGCGCCTCATCGTGTTCGATATTGACGAGGATACCGGCGCGAAGTCGATCAAGGACATCAAGGAGCAGGACGTTTACATGGGCGATATGCCGCTCATGACCATGAACGGCACCTTCATCGTCAACGGCACCGAGCGCGTCATCGTCTCGCAGATGCACCGTTCGCCGGGCGTGTTCTTCGATCACGACAAGGGTAAGTCGCACTCCAGCGGCAAGCTCCTGTTCGCCGCCCGCGTCATCCCTTATCGCGGCTCCTGGCTGGACATCGAATTCGATTCCAAGGATGTCGTGCACGCCCGCATCGACCGCCGCCGCAAGATTCCGGTGACGTCGCTTCTGATGGCGCTCGGCATGGATGGCGAAGAAATCCTGTCGACCTTCTACAACAAGATTTCCTACCGCCGCGCTGGCGATCATTGGCGCATTCCGTTCAATGTCGAGCGCTTCCGCGGCCTCAAGGCCGTCAGCGACCTGGTTGATGCCGACACCGGCGAGATTGTCGTCGAGGCCGGCAAGAAGATCACCGCGCGCCAGGCCAAGCAGCTTGGCGAAAAGGGCCTGAAGGCGATCAAGGCGACCGACGAGGACCTGCTCGGCAACTATCTTGCCGAGGACATCGTCAACTACCAGACCGGCGAGATCTTCCTCGAGGCTGGCGACGAGATCGACGAAAAGACGCTCAAGGTTCTGCTGTCGACGGGCGAGGACGAGATCCAGATTCTCGACATCGACCACGTCAATGTCGGCGCTTACATTCGCAATACGCTGGCTGTCGACAAGAACGAGAGCCGTCAGGACGCGCTGTTCGACATCTATCGTGTCATGCGTCCGGGCGAGCCGCCGACGCTCGAGACCGCCGAAGCCATGTTCAACTCGCTGTTCTTCGACAGCGAGCGCTATGACCTGTCGGCTGTCGGCCGCGTCAAGATGAACATGCGCCTCGAACTCGACGCGGAAGACACCGTACGCGTGCTGCGCAAGGAAGACATCCTTGCCGTGGTCAAGACGCTGGTGGAACTGCGCGACGGCAAGGGCGAGATCGACGACATCGACAATCTCGGCAACCGCCGCGTGCGTTCGGTCGGCGAGCTGATGGAAAACCAGTACCGCGTCGGCCTTTTGCGCATGGAGCGCGCGATCAAGGAACGTATGTCCTCGATCGAGATCGACACGGTCATGCCGCAGGACCTGATCAACGCCAAGCCGGCGGCAGCCGCCGTGCGCGAGTTCTTCGGTTCCTCGCAGCTGTCGCAGTTCATGGACCAGACCAACCCGCTGTCGGAAATCACCCACAAGCGTCGCCTGTCGGCGCTTGGACCGGGCGGTTTGACGCGTGAGCGCGCCGGCTTCGAGGTGCGCGAC
PROTEIN sequence
Length: 559
MAQTQTFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVDEPQGGRPDEGLQAVFRSVFPISDFSGASMLEFVKYEFEAPKFDVDECRQRDLTYAAPLKVTLRLIVFDIDEDTGAKSIKDIKEQDVYMGDMPLMTMNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLFAARVIPYRGSWLDIEFDSKDVVHARIDRRRKIPVTSLLMALGMDGEEILSTFYNKISYRRAGDHWRIPFNVERFRGLKAVSDLVDADTGEIVVEAGKKITARQAKQLGEKGLKAIKATDEDLLGNYLAEDIVNYQTGEIFLEAGDEIDEKTLKVLLSTGEDEIQILDIDHVNVGAYIRNTLAVDKNESRQDALFDIYRVMRPGEPPTLETAEAMFNSLFFDSERYDLSAVGRVKMNMRLELDAEDTVRVLRKEDILAVVKTLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRVGLLRMERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRD