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SCN18_30_10_14_R5_P_scaffold_2521_6

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(4516..5055)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination/antitermination protein NusG n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HV88_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 179.0
  • Bit_score: 313
  • Evalue 1.20e-82
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 179.0
  • Bit_score: 346
  • Evalue 1.80e-92
NusG antitermination factor similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 179.0
  • Bit_score: 310
  • Evalue 1.70e-82

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGACCGCGCGCTGGTACATCGTCCACGCTTATTCGAACTTTGAAAAAAAGGTTGCCGAAGACATTGAGAACAAGGCCAAGCAGAAGGGGCTGAGCGAACGCATCGAGCAGATCGTCGTCCCGACTGAGAAGGTGGTCGAGGTTCGTCGCGGCAAGAAGGTGGACGCCGAGCGCAAGTTTTTCCCCGGCTACGTCTTGATGAAGGCCGAGCTCAACGATGCGGTGATCAGTCTCGTCAAGAACACGCCGCGCGTGACGGGCTTCCTCGGTGAAGACAAGCATACGGCAAAGCCGATGCACATCACCGACAAGGAGGCCGAGCGCATCCTGCACCAGGTGCAGGAAGGCGTGGAGCGGCCAAAGCCGTCGGTCACTTTCGAGATCGGTGAGGCCATCCGCGTATCCGACGGGCCTTTCGCGTCGTTCAACGGCTTCGTTCAGGAAGTCGACGAGGAGCGCGCCCGCCTCAAGGTGGAAGTGTCGATCTTCGGCCGCGCCGTGCCAGTGGATCTGGAATTCGGACAGGTCGAAAAGGGCTGA
PROTEIN sequence
Length: 180
MTARWYIVHAYSNFEKKVAEDIENKAKQKGLSERIEQIVVPTEKVVEVRRGKKVDAERKFFPGYVLMKAELNDAVISLVKNTPRVTGFLGEDKHTAKPMHITDKEAERILHQVQEGVERPKPSVTFEIGEAIRVSDGPFASFNGFVQEVDEERARLKVEVSIFGRAVPVDLEFGQVEKG*