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SCN18_30_10_14_R5_P_scaffold_2023_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(2..1207)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y5U5_MESOW similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 403.0
  • Bit_score: 713
  • Evalue 6.90e-203
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 403.0
  • Bit_score: 713
  • Evalue 2.00e-203
Type II secretion system protein E {ECO:0000313|EMBL:AEH88501.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 403.0
  • Bit_score: 713
  • Evalue 9.70e-203

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGAGCAGCCGCTTTTCCACGCTGCAAAATCGCGATCTGCGCGCTGAACGACCGGTCGAGACGGCTCCGGCGACCAGCCCGGCCATCGTCATCCCAACGACGCGGAAGCCGGTCGCCGCGAAATCCGAGACCACGGCAAAGGGGGCCGACAAGGTACTCGACGCACGCGTGCGCATCCATCGCATGCTGCTCGACGAGATCAATCTCGTGGCACTCGAGCGTTTGCCTAAAGAAGAGATGCGTCGGCAGGTGCACGACTTCGTTTCGGAAAAGACGCGCCATGAGCGCATGGCGATCAATGTCGCTGAACTGGACGCTCTGGTTGATGATATCGTTGACGAAATGGTTGGGCTGGGGCCGTTGGAGCCTCTGCTGAAGGACCCCGAGATCAACGATATTCTGATCAACGGCCATCACAACTGCTTCGTCGAACGCAAGGGCAAGCTTCAGCAGGTCCACATTCCGTTCAAGGATGAGGCGCATCTGCTCCGCATCATCAACAAGATCGTCGCAGCCGTCGGTCGTCGCGTTGATGAATCGCAGCCGATGGTCGACGCGCGCATGCAGGACGGTTCGCGTTTCAACGCCGCCATCCGTCCGATTGCCGTCGATGGACCTCTGGTCTCGATCCGAAAATTCTCCAAGAACAAGCTTGGCCTGCACAAACTGGTCGAATTTGGCGCCATTACCCAGAACATGGCCGAGGTTCTCGCCGCTGCCGTGAATGCGCGCAAGACCACCATTATCTCGGGTGGTACCGGCACCGGTAAGACCACAATGCTGAATGCCCTATCGGCCTTCATTCCCGAAGACGAACGCCTCATCACCATCGAGGATGCGGCCGAGCTGCAATTGCAGCAGCCTCATGTAGCCCGAATGGAAACGCGTCCGGCCAACGTCGAAGGGCAGGGCGAGTTGAAGCAGCGCGATCTGGTCAAGAACGCGCTTCGAATGCGACCTGACCGCGTTATCCTCGGCGAGTGCCGTGGTGAGGAAGCGTTCGACATGCTTCAGGCCATGAACACCGGTCACGAAGGTTCAATGGCGACCATCCATGCCAACACCCCTCGTGACGCGATTGGGCGTCTCGAACAGATGCTTGGCATGACCGGGATGCCGATGACCGTGCAGTCCATTCGCAGCCAGATATCGAGCGCGCTCGATATCATCGTGCAGTTGACGCGCTTGTCTGACGGCAAGCGCAAG
PROTEIN sequence
Length: 402
MSSRFSTLQNRDLRAERPVETAPATSPAIVIPTTRKPVAAKSETTAKGADKVLDARVRIHRMLLDEINLVALERLPKEEMRRQVHDFVSEKTRHERMAINVAELDALVDDIVDEMVGLGPLEPLLKDPEINDILINGHHNCFVERKGKLQQVHIPFKDEAHLLRIINKIVAAVGRRVDESQPMVDARMQDGSRFNAAIRPIAVDGPLVSIRKFSKNKLGLHKLVEFGAITQNMAEVLAAAVNARKTTIISGGTGTGKTTMLNALSAFIPEDERLITIEDAAELQLQQPHVARMETRPANVEGQGELKQRDLVKNALRMRPDRVILGECRGEEAFDMLQAMNTGHEGSMATIHANTPRDAIGRLEQMLGMTGMPMTVQSIRSQISSALDIIVQLTRLSDGKRK