ggKbase home page

SCN18_30_10_14_R5_P_scaffold_2023_5

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(4161..5069)

Top 3 Functional Annotations

Value Algorithm Source
Flp pilus assembly protein CpaB n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y839_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 302.0
  • Bit_score: 435
  • Evalue 2.70e-119
Uncharacterized protein {ECO:0000313|EMBL:CDX44984.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 303.0
  • Bit_score: 438
  • Evalue 5.90e-120
Flp pilus assembly protein CpaB similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 299.0
  • Bit_score: 429
  • Evalue 5.50e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGATCGGCATTGCGGCCGTTTTCGGTGCGATCTCGATCTTCGCTGCCGATTTCTGGATCAAGAGCCAGGCTGAAGCCGACATCGTCAAGACATCGTCGGTCACGCCGCCGCACCAACCGGCTGTGGAATTCAAGACCATCGTCGTTGCCAACGCGCCGTTGCGCTACGGCATGGAGTTGGAAGCCGCGCAGCTTTCCGAAATTCCATGGCCGCAGGCGTCGCTGCCGCAGGGAGCTTTCAACAGCGTCGATGCGCTGTTGTCAGAAGGCAAGCGTGTGGTGTTGTCGCCGATAGAGCCTAACGAACCAGTCCTGCTGGCCAAGCTTTCCGGTCCAAACGGCCGCGCCACCCTTTCCAACATGCTGATGCCTGGAATGCGCGCCGTAACCATTCGCACCGACGAGATCGCGGGCGTCGGCGGCTTCATCACGCCCGGCGATCGCGTCGATGTCGTGCTGACGCGCGATGCCGGAGCCATTGAGGAGGTGTCCAAGAATGCCGATGGTGCCGCTGGCTCAACAGTTACGACGGAAATCGTTGTCGCCGGCGCCAAAGTGCTCACCGTCGGGCAGGGCGCCGATGAGCGCCAGACGACCCCTCAGGTTGCCAATTCGATAACAATCGAAGTGAACGAGGAAGGCGCGCGCAAGGTGGCGCTTGCCCGCACGGTTGGAACTCTGTCTCTGACGCTGCGCTCTGCTACCGATGCGGAGGTTACTTCCGGTGGACTCACCACGATCTCGTCCTTCGGCGGCTCGGTTGCAGCGGGGGTTCAGTCAGCAGCCGGAGCGCTGTTCAGCACGTCGGGTTCGGATGTGCCCAAGATGAAGACTGTCATCGTGACCCGCGGTCTGGTGGCGCAGGAATACAAGGTCATGCGGCAGGAACTGCCGCAGGAACAGAACTGA
PROTEIN sequence
Length: 303
MIGIAAVFGAISIFAADFWIKSQAEADIVKTSSVTPPHQPAVEFKTIVVANAPLRYGMELEAAQLSEIPWPQASLPQGAFNSVDALLSEGKRVVLSPIEPNEPVLLAKLSGPNGRATLSNMLMPGMRAVTIRTDEIAGVGGFITPGDRVDVVLTRDAGAIEEVSKNADGAAGSTVTTEIVVAGAKVLTVGQGADERQTTPQVANSITIEVNEEGARKVALARTVGTLSLTLRSATDAEVTSGGLTTISSFGGSVAAGVQSAAGALFSTSGSDVPKMKTVIVTRGLVAQEYKVMRQELPQEQN*