ggKbase home page

SCN18_30_10_14_R5_P_scaffold_2036_4

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(2022..2849)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, membrane spanning protein (Nitrate/sulfonates) id=3348591 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 247.0
  • Bit_score: 227
  • Evalue 1.00e-56
putative sulfonate ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 260.0
  • Bit_score: 197
  • Evalue 4.20e-48
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 247.0
  • Bit_score: 227
  • Evalue 1.40e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGGTGCCTGAGCTGCCGCAAGCTACCCCTGTGGCCGAACCGACTTCTACGCGGGATGGCATCCCCGGGGTTTATCGAGCCTTCTCCATCGCGCTGTTCGTCCTGCTGTGGCATGTGATCAGCGTCGCCAATCGGGATTTGGTCCACTTCTTCGACCCAATCCTGATACCGGGACCGGTGGAGGTCTACCAGGCCGGCATAGAGTTCAGCAAATCCGGCCAGTTGCAGCGCGACATCATCGCTACCGTCTATCGCGTAGTGGCAGGATTCGGCTTGGCGGCGCTCACCGGGCTTCTGGTCGGTGTGGCGGTCGCGACCTGGCGTCCTCTGGCGGTGCTGTTCGAGCCTGTGATCGAACTGCTTCGTTCCATTCCGCCACTGGCGTTCTTGCCGATGATGGTGCTCTGGTTCGGAATAGGTGAAGCGTCCAAGATCGCGTTCATCGCCTACGCCGCCTTCTTCCCGATGTTCATCACGACGCTGGAGGGGGTGAAGTTTGTCGATCCGGTGCTGGTAAGGGCGGCTGCCAGTCTTGGGGCCAAGCCGATGCATATCCTGCGCTATGTGGTGCTGCCTGCGGCTCTCCCTGGTATCATTACGGGTTTGCGGCTGGCTTTGAGCCTGTCCTTCTTCGTGATTGTCGCCGCAGAGTTCGTTGCCGCCGATTCCGGTCTCGGTTTCATGATCAACGACGCCAGAACCTTCTTTCTCATGCCGCAAATGCTGCTCGGCGCCATCGTGACTGGCATCATCGGCTTCCTGTTCAACGAATTGTTCCGGCTATTGGAGGCGCGGCTCTTCAGATGGCGAAAGGGCGGGAGGACATGA
PROTEIN sequence
Length: 276
MVPELPQATPVAEPTSTRDGIPGVYRAFSIALFVLLWHVISVANRDLVHFFDPILIPGPVEVYQAGIEFSKSGQLQRDIIATVYRVVAGFGLAALTGLLVGVAVATWRPLAVLFEPVIELLRSIPPLAFLPMMVLWFGIGEASKIAFIAYAAFFPMFITTLEGVKFVDPVLVRAAASLGAKPMHILRYVVLPAALPGIITGLRLALSLSFFVIVAAEFVAADSGLGFMINDARTFFLMPQMLLGAIVTGIIGFLFNELFRLLEARLFRWRKGGRT*