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SCN18_30_10_14_R5_P_scaffold_1875_6

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 3439..4614

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YDC8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 386.0
  • Bit_score: 558
  • Evalue 4.70e-156
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:EHH10228.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 386.0
  • Bit_score: 558
  • Evalue 6.60e-156
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 389.0
  • Bit_score: 538
  • Evalue 1.10e-150

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1176
ATGAACGGCAGTCTTTCGCCTGCGCCAAAGCCCGGCCCCTTGGCCGGTGTGACGGTGATCGAAATGGCGGGCTTGGGGCCGGTACCGCTGGCCAGCCTGATCCTGTCCGAAATGGGTGTCGATGTCGTCCGCATCGAGCGGCAGAGTTCGGATCGGCCGTTCCTGCAACTGCCAGATGACTGCAACCTCGACCGCCATGGCCGCTCGATCCTCAAGCTCGACCTCAAGCATCCGCAAGGTGTCGAACTCGTGTTGCGTCTCGCCGAAAATGCAGACGCTCTTGTCGAAGGTTTCCGCCCCGGCGTCATGGAACGGCTCGGTCTTGGCCCGGACACGGTCCTGAAACGAAGTCCGGCGCTCGTCTACGGACGCATGACCGGGTTCGGTCAGGACGGACCGTTAGCAGGCCGCGCCGGCCACGACATCACCTATCTTGCCCTGTCCGGTATCCTTCATGCGATTGGCCCCGCTGACGGAAAGCCGGTACCGCCGCTCAATCTGGTAGGAGACTATGCCGGCGGTACGATGATGCTGATTGCCGGTTTGCTGGCCGCCCTTTTCCAGCGCACCAGAACCGGCAGGGGTCAGGTCATCGACGCATCCATGGTGGAAGGCGCTTCGATGCTCGCCGCACCCATCCACGCTTTCATGGCGGCAGAGCTGTGGAACGATCGACGCGGGCAGAACCTGCTCGATTCCGGCGCGCCATTCTACGACACCTACGAAACCGCCGATGGCCGCCACATGGCCGTTGGTTGCCTCGAACCGCAGTTCTTCGCCGAATTTGCACGCCTGCTTCCCCTCGACGCGCATTTCATTGGCGCACAGTACGAAAAGAACCTGTGGCCGCGAATGCGCGAGGAGATCGCCACAATGTTCCGGCAGAAAACCCGTGACCAATGGGCGGAAGTCTTTGCCGGCACCGATGCCTGCGTAACCCCCGTGCTTTCGTTTGCCGAAGCAAGGCAGCACCCCCACGCCGTCGCGCGACAGGCCTACGTCAATGTTGGGCAATTCGAGCGCCCTGCCCCATCGCCGCGCTTTTCCGCCTCTCCCACTGCGGTAGCAGCACCACCCGACAAAACCACTTTGGACCCTTCCGCGATACTTGCGCGCTTCGGCATTTCCGAAAGCGACGCCGAGGCCCTTGTCAAATCCGGTATTGTTGGCCAATAA
PROTEIN sequence
Length: 392
MNGSLSPAPKPGPLAGVTVIEMAGLGPVPLASLILSEMGVDVVRIERQSSDRPFLQLPDDCNLDRHGRSILKLDLKHPQGVELVLRLAENADALVEGFRPGVMERLGLGPDTVLKRSPALVYGRMTGFGQDGPLAGRAGHDITYLALSGILHAIGPADGKPVPPLNLVGDYAGGTMMLIAGLLAALFQRTRTGRGQVIDASMVEGASMLAAPIHAFMAAELWNDRRGQNLLDSGAPFYDTYETADGRHMAVGCLEPQFFAEFARLLPLDAHFIGAQYEKNLWPRMREEIATMFRQKTRDQWAEVFAGTDACVTPVLSFAEARQHPHAVARQAYVNVGQFERPAPSPRFSASPTAVAAPPDKTTLDPSAILARFGISESDAEALVKSGIVGQ*