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SCN18_30_10_14_R5_P_scaffold_1882_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(3..425)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component (Fragment) n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YBB7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 141.0
  • Bit_score: 209
  • Evalue 1.50e-51
Putrescine/spermidine ABC transporter permease {ECO:0000313|EMBL:EZQ17434.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 141.0
  • Bit_score: 210
  • Evalue 1.20e-51
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 142.0
  • Bit_score: 198
  • Evalue 7.40e-49

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGACCAATGCCGCCGCGTCCGTCCCTGCCAGCCTTTCAGCCGATGAGGAAAAATCCGCAGGCGCCCGTCTTTTGTCGGGCATTGCGTCCCGCCTCGTCATCCTCATTCCCTATTGCTGGCTGCTGTTCTTCTTCCTCATTCCTTTCGTCATCGTCTTCAAGATATCGCTGTCGCAGACGGCGATCTCGATGCCGCCCTATACGCCGGCGCTCGATTTCGGGGCCGGCCTTGCGGGGTTCACCGATGCGCTGAAACAGCTGAGCTTCGACAATTATGTCTGGCTGACGGAAGACGCTCTTTATTTCAACGCTTACGTCTCCAGCGTCGTCATCGCCGGCATTTCGACTTTCCTGACCCTTCTGGTTGGCTATCCGATCGCCTACGGCATGGCGCGTGCGCCGGCTTCGCTCAGGCCGACGCTG
PROTEIN sequence
Length: 141
MTNAAASVPASLSADEEKSAGARLLSGIASRLVILIPYCWLLFFFLIPFVIVFKISLSQTAISMPPYTPALDFGAGLAGFTDALKQLSFDNYVWLTEDALYFNAYVSSVVIAGISTFLTLLVGYPIAYGMARAPASLRPTL