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SCN18_30_10_14_R5_P_scaffold_1882_3

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(1680..2780)

Top 3 Functional Annotations

Value Algorithm Source
putrescine/spermidine ABC transporter substrate-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E948C5 similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 363.0
  • Bit_score: 640
  • Evalue 8.90e-181
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 366.0
  • Bit_score: 658
  • Evalue 4.40e-186
family 1 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 363.0
  • Bit_score: 565
  • Evalue 6.00e-159

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
ATGAACATCAAGGCAAGCTGGCTCGTCGCCACGACCGCGGTAGCGGCCGCGACCTTCGCTTTTGCGGCACAGGCGCAGGAGCGCGTGGTCAACGTCTATAACTGGTCGGATTATATCGATTCCTCGATCATCGAGGACTTCACCAAGGAAACCGGCATCAAGGTCGTCTATGACGTCTACGATTCCAACGAAATCCTCGAAACCAAGCTTCTGGCCGGCGGCAGCGGCTATGACGTCGTGGTGCCGACCGGAAGCTTCCTCGCCCGCCAGATCCAGGCCGGCGTCTACCAGAAGCTCGACAAGTCGAAGCTGCCCAACCTGAAGAACATGTGGGACGTGGTTTCCGAGCGCACCGCGATCTTCGACCCCGGCAACGAATACTCGATCAACTATATGTGGGGCACGATCGGCATCGGCTACAACATCAAGAAGATTCAGGAGGTGCTGGGCACCGACAAGATCGATAGCTGGAAGGCGGTCTTTGATCCGGAGCAGGCGGCCAAGCTGAAGGATTGCGGCATCAACTTCCTCGACTCGCCGACCGACATGATCCCGGTGACGCTGGCCTATCTTGGCTTGAATCCAGACAGCCATGAGGCCGGAGACATCGCCAAGGCCGAGGAGGCGCTTTTGGCGGTGCGCCCCTTCGTGCGCAAGTTCCATTCCTCGGAATTCATCAATGGTCTCGCCAATGGCGACATCTGCGCAGCCGTCGGCTGGTCTGGTGACATCTTCCAGGCGCGCGACCGCGCCGACGAGGCGAAGAACGGCGTCGAGCTGGCCTATGCCATTCCGAAGGAAGGCACGCAGATGTGGTTCGACCAGATGGCGATTCCCGCTGACGCTCCGCACGTCGCCGAGGCGCATGAGTTCCTCAACTACATGATGCGGCCGGAAGTGATCGCCAAGTCGTCGAACTATGTCTACTACGCCAACGGCAACAAGGCTTCGCAGGAATTCCTCGACGCCGAAGTGCGCGACGATCCGGCTGTCTATCCGCCGGAGGACGTGCTGGCCAAGCTGTTCGTCAACACGCCGCTCGACCCCAAGACCCAGCGTCTGTTCACGCGCAGCTGGACCAAGGTCGTCACCGGTCAATAA
PROTEIN sequence
Length: 367
MNIKASWLVATTAVAAATFAFAAQAQERVVNVYNWSDYIDSSIIEDFTKETGIKVVYDVYDSNEILETKLLAGGSGYDVVVPTGSFLARQIQAGVYQKLDKSKLPNLKNMWDVVSERTAIFDPGNEYSINYMWGTIGIGYNIKKIQEVLGTDKIDSWKAVFDPEQAAKLKDCGINFLDSPTDMIPVTLAYLGLNPDSHEAGDIAKAEEALLAVRPFVRKFHSSEFINGLANGDICAAVGWSGDIFQARDRADEAKNGVELAYAIPKEGTQMWFDQMAIPADAPHVAEAHEFLNYMMRPEVIAKSSNYVYYANGNKASQEFLDAEVRDDPAVYPPEDVLAKLFVNTPLDPKTQRLFTRSWTKVVTGQ*