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SCN18_30_10_14_R5_P_scaffold_1902_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(3..596)

Top 3 Functional Annotations

Value Algorithm Source
D-ribose transporter ATP binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FHW8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 187.0
  • Bit_score: 297
  • Evalue 7.60e-78
D-ribose transporter ATP binding protein {ECO:0000313|EMBL:ESX77708.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 187.0
  • Bit_score: 297
  • Evalue 1.10e-77
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 194.0
  • Bit_score: 227
  • Evalue 2.10e-57

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGGGAGGATATGTGCTGGACGATCACGCCACCGTCAACCGCACCGAAAGCGATGCCGCCTCTGCCGCGCCGCTTGCACTCAAGGACGTCACCAAGGCGTTCGCAGGCACCGTCGCGCTCAAGGATGCCAGCATCGAACTGCGCGCTGGCGAAGTACTGGCGCTTCTCGGGGAAAACGGAGCGGGCAAAAGCACCTGCGTAAAGCTTCTCGCAGGCGTCTATACACCCACGGAAGGCAGCATCGTCCTCGACGGGCAGCCGGCGGTCTTCCACTCGCCACTCGATGCGCAGATGGCGGGCATTGCCGTCATGCACCAGCATCCGGGCCTTTTTCCCGACCTGTCGATCGCCGAGAACATTTATCTTGGCCATATGCCGCGCGACAGCTTCGGCGGCATCGACCACGCGGCAATCCTGTCCGGCGCGCGCAAGGTCATTGCCCTGGTCGGCCTCGATGTCCCCGTCGAGACCCGTCTCGGAACGCTCAGGACTTCCGAGCAGCAATTGGTGGAAATCGCGCGCGCGCTCTCGCTCGATGCGCGCGTCCTCATCATGGACGAGCCGACCGCCGCTTTGTCCCAGCGCGAGGTGGAG
PROTEIN sequence
Length: 198
MGGYVLDDHATVNRTESDAASAAPLALKDVTKAFAGTVALKDASIELRAGEVLALLGENGAGKSTCVKLLAGVYTPTEGSIVLDGQPAVFHSPLDAQMAGIAVMHQHPGLFPDLSIAENIYLGHMPRDSFGGIDHAAILSGARKVIALVGLDVPVETRLGTLRTSEQQLVEIARALSLDARVLIMDEPTAALSQREVE