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SCN18_30_10_14_R5_P_scaffold_2290_5

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(3088..4080)

Top 3 Functional Annotations

Value Algorithm Source
Extra-cytoplasmic solute receptor n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S6F9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 306.0
  • Bit_score: 283
  • Evalue 1.90e-73
Uncharacterized protein {ECO:0000313|EMBL:KKB85704.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 306.0
  • Bit_score: 476
  • Evalue 1.60e-131
extra-cytoplasmic solute receptor family protein 107 similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 319.0
  • Bit_score: 280
  • Evalue 3.50e-73

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGCATTTGAACGGACGTAAGCATAAAGCAAGCTTCTGGACCGCTGTCGCGCTCGGCGCGGCTGTGGTGTTTTCGGGATCGGCGTTCGCGCAGGAGTGGGCACCCAGCAAGCCGCTGCGCCTGATCGTACCTTACCCCGCAGGTGGAACGAGCGACACAATCGCTCGCCTGATTGCGCCGGGCCTTGGTGAAGCGTTGGGGCAACCGGTCGTTGTCGAGAACAAGACAGGTGGCGGCGGTGTTACTGGCACCGAGTCGATCCTGCGGTCTCCTGCAGACGGGCACACGTTTGGTATTGTTGCCAGTTCCTACGCTTCAAGCGTCAATCTCGTTCCAGACCTGCCGTTTGATCCGATCAAGGATGCACAGCCGCTGACTATGGTTACACGCGTCGGCGTCGCTCTGGTTACCAATCCCGACTATCCGGCCAAGACGCTGTCGGAACTGCTGGCGATGGCCAAGGAAAAGCCCGGCACCATTGCCTACGGCTCCGCCGGCAACGGCCTGTCCGGCCATTTTTCAGGCGAGGCGATGAAGCTGTCCGCCGGTGTGGACATGGTTCACGTACCCTACCGCGGCGGCGCACCGGGCTTGAACGACGTCATCGCCGGTCAGATACCGATGATGTTCAATGTTATCTCATCGGTGATGTCATCCGTCGAGGGCGGCAAGGTCCGTCCTTTGGTTGTCACCAGCGCCGAACGCTCCAAGGTCTTGCCGGATGTGCCGACGATGGCCGAGGCCGGGGTAGCCAACGTCGAGATCTATGAGTGGTACGGGCTGGTCGCACCCGCCGGCATTCCGCCGGAAGCCACCAAGCGTCTTCATGCCGAGCTTGAAAAAGTCCTGAAGGAGCAGGCTTTCGTCGAGCGGATGGACAAGCAGGGCATCGAAGTGGTGGCGAATTCGCCGGAAGAGTTCACGGCCTTCATCATCTCCGAGATCGACCGTTTCGGCACGCTCATCAAGTCGGCGAACATTTCGCTTGACTGA
PROTEIN sequence
Length: 331
MHLNGRKHKASFWTAVALGAAVVFSGSAFAQEWAPSKPLRLIVPYPAGGTSDTIARLIAPGLGEALGQPVVVENKTGGGGVTGTESILRSPADGHTFGIVASSYASSVNLVPDLPFDPIKDAQPLTMVTRVGVALVTNPDYPAKTLSELLAMAKEKPGTIAYGSAGNGLSGHFSGEAMKLSAGVDMVHVPYRGGAPGLNDVIAGQIPMMFNVISSVMSSVEGGKVRPLVVTSAERSKVLPDVPTMAEAGVANVEIYEWYGLVAPAGIPPEATKRLHAELEKVLKEQAFVERMDKQGIEVVANSPEEFTAFIISEIDRFGTLIKSANISLD*