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SCN18_30_10_14_R5_P_scaffold_2381_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 569..2224

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c oxidase subunit 1 {ECO:0000313|EMBL:EYR81700.1}; EC=1.9.3.1 {ECO:0000313|EMBL:EYR81700.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 553.0
  • Bit_score: 966
  • Evalue 1.50e-278
ccoN; cbb3-type cytochrome c oxidase subunit I (EC:1.9.3.1) similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 551.0
  • Bit_score: 911
  • Evalue 6.70e-263
cytochrome C oxidase n=1 Tax=Kaistia granuli RepID=UPI000373B191 similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 548.0
  • Bit_score: 973
  • Evalue 5.10e-281

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1656
ATGGTCTCGCAACTGACGACATCCGAACGGCAATATGCGCTGGTCACTCTGCTCCTGCTCGGCCTTGGCGGCTTGGCGATGGCGGCCATGGGGCGCGGCGATCCAATCGCCGTGCACGGCTATATTGTCCTGCTTTTCGCAATCGGGTTGTCCTTTGTGGTCATGGCCGGCTACTACGCGCCGGAACCCGACAAGGATCGCCTGTCGCGCTACTACGACGATCCCACCAGGGTCGGCATCGTCCTTTCCATCGCCTGGGCCGTCGTCGGCATGTTTGTCGGCGTCTGGGTTGCCGCCTTGCTGGCCTGGCCCGACCTTACCTTCGATCAGGCATGGGCAAGCTTCGGCCGCCTGCGCCCGGTGCATACTTCGGGCGTCATCTTCGGCTTCGGCGGCAACGCGCTCATCGCCACCTCGTTCCATGTTCTCCAGCGCACCACCCGTGCGCGCCTGCCCGGCCAGTTCGCGCCGTGGTTCGTGCTGCTTGGCTACAACCTGTTCTGCGTCGTCGCCGCCAGCGGCTACCTGATCGGCGTCACCCAGTCGAAGGAATATGCCGAACCCGAATGGTATGCCGACATCTGGCTGGTGCTCGTGTGGGTGACCTATTTCCTCATCTACCTGCGCACGCTGGCGCGGCGCAAGGAACCCCATATCTACGTGGCCAACTGGTATTACATGGCCTTCATTCTGGTGGTTGCGATGCTGCACATCGTCAACAACATCGCCGTGCCGATCTCCTGGAGTTCCGCGAAGAGCTACTCGGTCTATTCCGGCGTTCAGGATGCGATGGTCCAGTGGTGGTATGGCCACAATGCGGTGGCGTTCTTCCTCACCGCCGGCTTCCTTGGCATGATGTACTATTATCTGCCCAAGCGGGCCGGCAGGCCGATCTTTTCCTACCGGCTTTCGATCATCTCGTTCTGGGGCATTACCTTCTTCTACATGTGGGCGGGCTCGCACCACCTGCACTACACCGCGCTGCCGCAATGGGTTCAGACGCTCGGCATGACGTTTTCCATCATGCTGCTGGTGCCGTCGTGGGCGTCGGCCGGCAACGCGCTGGCAACGCTCAACGGCGCCTGGCACAAGGTGCGCGACGACGCCACGCTGCGCTTCATGATGGTCGCCGCAGTCTTCTACGGACTTTCCACCTTCGAAGGCTCGTTCATGGCCATTCGCCCGGTCAACTCTTTGTCGCACTACACCGACTGGACTGTTGGCCACGTCCATGCCGGTGCGCTCGGCTGGGTCGCGATGATCACCTTCGGCTCGATCTATGCGCTGGTGCCTTGGATGTGGAAACGCGAGGCGATGTATTCGTCGAGGCTTATCGAAGTGCACTTCTGGCTCGCCCTGTCAGGCACGATTGTCTACGTCTTCGCGATGTGGAATTCGGGCATCATCCAGGGCCTGATGTGGCGCACCTATAATGAAAGCGGTTCGCTGACCTATTCCTTCATCGACTCGCTCGTTGCCATGCATCCCTACTACATCGCCCGCGCGTTCGGCGGCCTCCTGTTCCTGCTCGGCGCCATCGTTGCCGCCTACAATGTCTGGATGACGATCCGCCAGAGCAAGCTCGAGGCGGCGCAGGGCAAGGAAGATGCCGATATCCCGTTGTTTGCCCGCGACGCAGTCCAGGCCGGAGAGTAA
PROTEIN sequence
Length: 552
MVSQLTTSERQYALVTLLLLGLGGLAMAAMGRGDPIAVHGYIVLLFAIGLSFVVMAGYYAPEPDKDRLSRYYDDPTRVGIVLSIAWAVVGMFVGVWVAALLAWPDLTFDQAWASFGRLRPVHTSGVIFGFGGNALIATSFHVLQRTTRARLPGQFAPWFVLLGYNLFCVVAASGYLIGVTQSKEYAEPEWYADIWLVLVWVTYFLIYLRTLARRKEPHIYVANWYYMAFILVVAMLHIVNNIAVPISWSSAKSYSVYSGVQDAMVQWWYGHNAVAFFLTAGFLGMMYYYLPKRAGRPIFSYRLSIISFWGITFFYMWAGSHHLHYTALPQWVQTLGMTFSIMLLVPSWASAGNALATLNGAWHKVRDDATLRFMMVAAVFYGLSTFEGSFMAIRPVNSLSHYTDWTVGHVHAGALGWVAMITFGSIYALVPWMWKREAMYSSRLIEVHFWLALSGTIVYVFAMWNSGIIQGLMWRTYNESGSLTYSFIDSLVAMHPYYIARAFGGLLFLLGAIVAAYNVWMTIRQSKLEAAQGKEDADIPLFARDAVQAGE*