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SCN18_30_10_14_R5_P_scaffold_1820_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(1566..2246)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF1A63 related cluster n=1 Tax=unknown RepID=UPI0003CF1A63 similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 224.0
  • Bit_score: 352
  • Evalue 2.30e-94
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:ESY81614.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 224.0
  • Bit_score: 352
  • Evalue 3.20e-94
redoxin similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 226.0
  • Bit_score: 349
  • Evalue 7.10e-94

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGGCAGACGGCAGAAAACTCTTTCCCACCACGCGCCTGATCCTTGCGGCTCTCGTCGCAGGAGCAATAACCGGCGCGGTCGCGGTATATGTCAGCGGCATGCTTGCTGGCAACAACGCAGCGCCAATCGAGGCGGTGGCCCAGGAGAGCGACGACACGGTTTGCACGGCGAAAGCCGAACGCGCCAAGACAATTGCAGCCGCCGCCACCGGCGAGGTTGCCGCTCTGATGCCTGCCGATCCGCCGCAATCACTCAAGTCGCTTGCCTTCAACGGACCTGACGGCAAGCCGCATGGCTTGGCCGGGCACACCGGCAAGACGGTGCTGCTCAACCTGTGGGCAACATGGTGTGCGCCCTGCCGCGCCGAAATGCCGGCGCTAGACGCACTGCAAAAGGAATTGGGCAGCGACAAATTCGAAGTGGTCGCCGTCAACGTCGATACCGGCGACGACGCCAAGCCGAAGGCCTTCCTCAAGGAAATCGGCGTCGAGAAGCTGAACTACTACAGCGACCATTCCCTGGCACTGTTCAACGACGTCAAGGAGCGCGGCCTTGCGCTCGGCCTTCCGGTAACCATGCTGATCGACGGCGACGGCTGCCTTGTCGCCCATATGAACGGCCCGGCCGAGTGGTCAGGTACCGATGCCAAAAATTTGATTGAAACGGCACTCAAGCCCTAG
PROTEIN sequence
Length: 227
MADGRKLFPTTRLILAALVAGAITGAVAVYVSGMLAGNNAAPIEAVAQESDDTVCTAKAERAKTIAAAATGEVAALMPADPPQSLKSLAFNGPDGKPHGLAGHTGKTVLLNLWATWCAPCRAEMPALDALQKELGSDKFEVVAVNVDTGDDAKPKAFLKEIGVEKLNYYSDHSLALFNDVKERGLALGLPVTMLIDGDGCLVAHMNGPAEWSGTDAKNLIETALKP*