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SCN18_30_10_14_R5_P_scaffold_1820_8

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(8316..8456)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FFL1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 46.0
  • Bit_score: 81
  • Evalue 1.50e-13
LysR family transcriptional regulator {ECO:0000313|EMBL:ESX68184.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 46.0
  • Bit_score: 81
  • Evalue 2.10e-13
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 46.0
  • Bit_score: 79
  • Evalue 1.60e-13

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 141
GGTTGCCGCGCCCTGACGACGGCCGATGGCTTCGGCGATGTCGATTCCTCCAACGTCGTCCTTCGCCGCAATGCTTCTGCCCGCGGCGAGGCCATCGACGGTATGGAAGAAGCCATCCGGGAAGCCTTCATCAACCGGTAG
PROTEIN sequence
Length: 47
GCRALTTADGFGDVDSSNVVLRRNASARGEAIDGMEEAIREAFINR*