ggKbase home page

SCN18_30_10_14_R5_P_scaffold_1484_9

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 9729..10319

Top 3 Functional Annotations

Value Algorithm Source
Oxygen regulatory protein NreC n=1 Tax=Ahrensia sp. R2A130 RepID=E0MTC5_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 193.0
  • Bit_score: 185
  • Evalue 3.20e-44
Oxygen regulatory protein NreC {ECO:0000313|EMBL:EFL87622.1}; TaxID=744979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ahrensia.;" source="Ahrensia sp. R2A130.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 193.0
  • Bit_score: 185
  • Evalue 4.50e-44
nitrate/nitrite response regulator protein similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 192.0
  • Bit_score: 139
  • Evalue 7.50e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
GTGACGAAGAGGATCCTGATTGCGGATGACCATGCGTTCGTCTCCTGGGGGGTCGCCAAGGCGCTCTCGGCGTTGGAAGACATCGAAGTGATCAAGTCAGTTGCAAACGGTATCGAGGCAATCATCGAGATCCGGAAGACCAAGCCGGACTGCGCGATCCTCGATTACAATATGCCAGGGGCGAACGGCCTGGAAGTCTTCCTGGAATCCAAGCGCTGGTCGCCTGATACCCGTTTCGTTCTCCTAACCGGCTCGGCGACTACGCAGACCGTCAACGCTCTGGTTGACGCAGGCATTCATGGTGTTGCCCTGAAGGACGGCACCGAGACTGAGATCATCGAGATTGTGCGCCAGGTCTGCGCCGGAAAGACCGCAATCGGCCCCAGTGCACGACTTCTGATGAGATTGCCTGCGGAAACTGTTGCGGTCACTGACCGCGAACTCGCTGTCTTGCAGGCAATCGCACGCGGGCATACCAACGCAAGCGCTGCCGAGAGTCTCGGCATCAGCCCAAAGACGGTTGATAGCCACCGCACCAGTCTGATGCGTAAATTCGACGTCAGCACATCAGCCAGCCTTCTTCTCGCTGCG
PROTEIN sequence
Length: 197
VTKRILIADDHAFVSWGVAKALSALEDIEVIKSVANGIEAIIEIRKTKPDCAILDYNMPGANGLEVFLESKRWSPDTRFVLLTGSATTQTVNALVDAGIHGVALKDGTETEIIEIVRQVCAGKTAIGPSARLLMRLPAETVAVTDRELAVLQAIARGHTNASAAESLGISPKTVDSHRTSLMRKFDVSTSASLLLAA