ggKbase home page

SCN18_30_10_14_R5_P_scaffold_1543_5

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(3145..3987)

Top 3 Functional Annotations

Value Algorithm Source
Phytoene synthase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FIM3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 272.0
  • Bit_score: 412
  • Evalue 3.00e-112
Phytoene synthase {ECO:0000313|EMBL:ESX73219.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 272.0
  • Bit_score: 412
  • Evalue 4.20e-112
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 280.0
  • Bit_score: 396
  • Evalue 3.70e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 843
ATGGGCGGGACCTCACAGTTCATCATGGATACGGTGCGCCGCGCCGATCATGACCGTCACCTCTCCGTCCTCTATGCGCCGCAGGATAAGCGGGACGCGCTGTTTGCCCTTTATGCCTTCAACGCCGAAATCGCCACGGTGCGAGACCGCATACGCGAGGCCCTGCCGGGCGAGGTTCGCTTGCAGTGGTGGCGCGATACGCTCGGCGCGCCGGCTGGCGAGACCGAGACGGGCCAGCCGATAGCCGATGCGTTGAAGCCGGCGATCAGCCAGTATTCCCTGCCGCTGTCCGCCTTCGACAATTATCTGGAAGCGCGCATCTTCGATCTCTACAACGATCCGATGCCGTCGCGCACGGATCTGGAAGGCTATTGCGGCGAGACCGCCTCGGCCCTGATCCAGCTTGCCGCCATGGTTCTCGATCCGGCGGAAGCGCCGCGCTTTGCGGAACTGGCGGGCAGGGCAGGCTGCGCACAAGCGATGGTCGGTCTGCTCCTGTTGCTGCCTATCCATCGGGCGCGAGGCCAGTGTTATGTTCCAGCCGACATCCTGACCGCGGTCGGTTCCTCACCGCAGGAATTTCTGTCCGGCGACGGCGGGCAGGGCGCGCTTAATGCCATCGATGCCATGATCGCGCTGGCGCACGAGCATCTGGCGGCGTTTGAGAGCACGGCTGCAACCTTGCCTGCCTCGCTACGTCCCGCTTTCCTGCCGCTCGCGCTGACAGGAGCGTTGCTTGGAAAGATGTCGGGCAATCAGCGCGCCTTGATGACAGGCGGCATCAAGCTTTCGCTCGCCCGTCGCCATTGGCTGCTGTGGCGGCGCGCCATGCATGGCTGGTAG
PROTEIN sequence
Length: 281
MGGTSQFIMDTVRRADHDRHLSVLYAPQDKRDALFALYAFNAEIATVRDRIREALPGEVRLQWWRDTLGAPAGETETGQPIADALKPAISQYSLPLSAFDNYLEARIFDLYNDPMPSRTDLEGYCGETASALIQLAAMVLDPAEAPRFAELAGRAGCAQAMVGLLLLLPIHRARGQCYVPADILTAVGSSPQEFLSGDGGQGALNAIDAMIALAHEHLAAFESTAATLPASLRPAFLPLALTGALLGKMSGNQRALMTGGIKLSLARRHWLLWRRAMHGW*