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SCN18_30_10_14_R5_P_scaffold_3714_5

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 3828..4139

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HU86_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 79.0
  • Bit_score: 102
  • Evalue 2.50e-19
Glycine betaine transport system permease protein OpuAB {ECO:0000313|EMBL:EYR78312.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 106.0
  • Bit_score: 119
  • Evalue 2.10e-24
proW; glycine betaine/L-proline transport system permease protein ProW similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 97.0
  • Bit_score: 72
  • Evalue 4.50e-11

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGAGCACGCCCACCGCAGACAGCACGCACCGCCCGATTGCCCCACGGCTTGACGGTGCCGCGCTGTCTTGGCCGTGGCTGATTGCCGGGGCGGCGTTTGTGCTTTTCTGGCGGTACGGCCAACCACTGGCGCAATGGGCATTCGACTATCCGCGCGGCTGGCAGGTGCCGGCGCAACGCTGGATCAGCAATGCGATGAAATGGCTGCTCGACAGTGCGAGCTTCGGGCTGTTCACCTTCACCGACCTGACCCGCTTCATTGCCCGCCTGATCGACCTGCCCTACCAGCTTGCCTTGAGCCTGCTTTCCACC
PROTEIN sequence
Length: 104
MSTPTADSTHRPIAPRLDGAALSWPWLIAGAAFVLFWRYGQPLAQWAFDYPRGWQVPAQRWISNAMKWLLDSASFGLFTFTDLTRFIARLIDLPYQLALSLLST