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SCN18_30_10_14_R5_P_scaffold_3787_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(1..558)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 186.0
  • Bit_score: 342
  • Evalue 2.70e-91
3-isopropylmalate dehydrogenase (EC:1.1.1.85) similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 186.0
  • Bit_score: 337
  • Evalue 1.80e-90
UPI0003CDFAD1 related cluster n=1 Tax=unknown RepID=UPI0003CDFAD1 similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 186.0
  • Bit_score: 342
  • Evalue 1.90e-91

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGACTTCGAAAAATCTCTTCCTGCTTGCCGGCGACGGCATTGGCCCCGAGGCGATGGCCGAGGTCAAGAAACTGATCGCGGCGATGAACGCCAAGCTGGGCAGCGGCTTTGCCACCGACGATGGCCTTGTCGGCGGCTCGGCTTATGACGCGCATGGACAGGCGATTTCCGAGGCCGATATGGCGAAGGCCCTTGCAGCCGACGCCGTCCTGTTCGGCGCCGTCGGCGGACCGAAGTGGGACGGCGTGCCTTATGATGTTCGCCCCGAGGCCGGCCTGCTGCGCCTGCGCAAGGACCTCGAGCTGTTCGCCAACCTGCGCCCCGCTATCTGCTATCCGGCGCTCGCCGCCTCTTCCTCGCTCAAGCAGGACGTCGTCGAGGGCCTCGACATCCTGATCGTGCGCGAACTGACCGGCGGCGTCTATTTCGGCGAGCCGAAGCAGATCATCGATCTCGGCAACGGCCAGAAGCGCGCCATCGACACGCAGGTCTACGACACCTTCGAGATCGAGCGCATTTCAGGCGTCGCCTTCGAGCTGGCGCGCACCCGCGCCAAC
PROTEIN sequence
Length: 186
MTSKNLFLLAGDGIGPEAMAEVKKLIAAMNAKLGSGFATDDGLVGGSAYDAHGQAISEADMAKALAADAVLFGAVGGPKWDGVPYDVRPEAGLLRLRKDLELFANLRPAICYPALAASSSLKQDVVEGLDILIVRELTGGVYFGEPKQIIDLGNGQKRAIDTQVYDTFEIERISGVAFELARTRAN