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SCN18_30_10_14_R5_P_scaffold_2549_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 1655..3037

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UF06_MYXSD similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 471.0
  • Bit_score: 303
  • Evalue 1.90e-79
GntR family transcriptional regulator {ECO:0000313|EMBL:KFA93046.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.1
  • Coverage: 468.0
  • Bit_score: 318
  • Evalue 1.00e-83
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 471.0
  • Bit_score: 303
  • Evalue 5.30e-80

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1383
ATGACCTACGAAGAGTGGATCCCGCAGCTTAGTGAGAATGGGGACCCGATCTATCGGCGCATCGTGTCGGCGATCGTTGACGATATCGCACAACAACGGCTGCGCCCCGGCATGCGTATGCCGGCGCATCGCGAGCTGGCGGATCAGCTGAACATCAATGTTGGCACCGTCACGCGCGCTTACACCTTGGCACGCGAGATGGGACTTCTGTCCGGAGAGATCGGCAGGGGTACATTCATCAACGCCCCCTCGCCAACGGAGCATGCCGTTGACGGAGGGCCGGCCGTAATCGACCTGATGATCAACAAGCCGCCGGCGTTGGACGACGGCGCGTCATTGCGTAAGGCGCTGAGCCAGATCGCCGAAGGGTTCTCGGTCACCCAGTTCCTGGAATATCCGCCTTCGAACGGGCAGGAGCGGCATCGCCTGGCGGCTACCAAGCTTGCGCAGATGACCGGTGTGGAGGCCAGTGTCGACCAGGTCGTGTTGTCCAACGGCGCGCAGCAAGCCTTGATGGCAGCGGTATCTTCATGTGTCGCACCGGGGGGCGTTCTGGCGACTGAGGTACTGAACTATGTGGGAATTCGTCGTCTGGCAGAGTTCCTGCGATTGCGGATTGCTGCGGTCGCAATCGACGAGCATGGCATGCTGCCAGACAGTTTTGAGCGGATCTGCCGCTCAGAAAAGGTCTCGGTCCTGGTTGTTACACCCTCAATACACAACCCCACCACCGCCACTTTATCGTTGGAACGTCGGCGGGAAATTGTACGCATTGCTGGTCACTATGGCGTGCCGATCGTCGAGAACGACATTTACGGCGCCCTGATCGAGAAGCCAGATCCTGCGCTGTTCACCATGGCGGAGACACCATGCTGGTACATCTGCGGCCTCTCGAAGGCGGTCAATTCGGGCATCCGCGTCGGATATGCCATTGCACCGGCTGAAAGTATTGGACAGGCGATGTCGGCGATCCATGCTTCCACCTGGACCGTCGCGCCTCTGATGCTGGAAATCGCGAGCCAATGGATTTTCGATGGCACCGTGGCCCGTATGATAGCGGGTCACCGGGTCGCCGTTGCCGAGCGCCAGAAGCTGGCCAAAGAGATTCTGGGTGAAACCTCCTTCCACGCGCATCCGCAGAGCTATCATATATGGTTGCCATTGCCGCTGCGCTGGCGTCCGCATGAATTCGTTGAAGCCTGTCTGAAAAACGGTGCCGCAGTTACCTCCGGCGCTCATTTCCAGACCAGCCCGAGCTACGTCCAGAATGCGGTTCGGGTCAGCCTGGGAGCGGAACCCGACATCGAGGTGCTTCGTATCGGCCTCGAACGGTTGCGGCAGACTTTGCAGGCGCCCCTGTCATTGGATGCGATGATTATCTGA
PROTEIN sequence
Length: 461
MTYEEWIPQLSENGDPIYRRIVSAIVDDIAQQRLRPGMRMPAHRELADQLNINVGTVTRAYTLAREMGLLSGEIGRGTFINAPSPTEHAVDGGPAVIDLMINKPPALDDGASLRKALSQIAEGFSVTQFLEYPPSNGQERHRLAATKLAQMTGVEASVDQVVLSNGAQQALMAAVSSCVAPGGVLATEVLNYVGIRRLAEFLRLRIAAVAIDEHGMLPDSFERICRSEKVSVLVVTPSIHNPTTATLSLERRREIVRIAGHYGVPIVENDIYGALIEKPDPALFTMAETPCWYICGLSKAVNSGIRVGYAIAPAESIGQAMSAIHASTWTVAPLMLEIASQWIFDGTVARMIAGHRVAVAERQKLAKEILGETSFHAHPQSYHIWLPLPLRWRPHEFVEACLKNGAAVTSGAHFQTSPSYVQNAVRVSLGAEPDIEVLRIGLERLRQTLQAPLSLDAMII*