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SCN18_30_10_14_R5_P_scaffold_2555_6

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 4554..5393

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 279.0
  • Bit_score: 424
  • Evalue 6.20e-116
shikimate 5-dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI000372E5B5 similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 276.0
  • Bit_score: 419
  • Evalue 1.90e-114
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 276.0
  • Bit_score: 417
  • Evalue 2.00e-114

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGGCTGACCCATTGGCAAGGGCTTTCGTCATCGGCCATCCGATTGCCCATTCGCGATCGCCGAAGATCCATCGCCATTGGCTCGAGGCGAGCGGCATTTCAGGCAGCTATGAGGCGATTGATGTCGCACCGGGTGACTTGGCCGAGTTCATCCGCAGCTTGAGGGAACGCGGCTTTCGTGGTGGCAACGTCACGATTCCGCACAAGGAAGCGGTATTCGGTCTTGTCGAACGGCTGGATGAAGCAGCCGAGGAGATCGGTGCCGTCAATACGCTTTGGTTCGAAGACGATGTCCTTTGGGGCGGCAATACCGATGCTTACGGATTTGCCGCCAACCTAGACGAATATGCCCCTGACTGGTTCCGCAGCGGACCGGCGATGGTGCTAGGAGCCGGCGGCGCGGCCCGGGCGATCATTCATGCCCTGAAGCAGCGCGGCGTGAAGGATATCCGCATCGTCAATCGAACCCTGTTGCGGGCGCAAGAGCTTGCCGACCGGTTCGGCCGGGGCGTCAGCGCACATGCGTCCGCCGCAACGGATGAACTGTTGGCTGATACGGGGCTGCTTATAAACACCACAGCGCTTGGCATGCATGGCAATGAAGGCTTGCCTGCGGACCCGAAACGGCTTCCCGGCACGGCGATTGTGACCGATATCGTTTATGTGCCGCTGCAAACGCCACTTTTGGCAGCCGCAGCAAGATGCGGACTGAAGACGGTGGATGGCCTCGGCATGCTGCTTCATCAGGCGGCTCCGGGTTTCGAGCATTGGTTCGGAAAACGCCCAGTGGTGACGCCAGCCCTGCGCGCCGCCATCGTGGCCGACCTTGGGGCGACTTGA
PROTEIN sequence
Length: 280
MADPLARAFVIGHPIAHSRSPKIHRHWLEASGISGSYEAIDVAPGDLAEFIRSLRERGFRGGNVTIPHKEAVFGLVERLDEAAEEIGAVNTLWFEDDVLWGGNTDAYGFAANLDEYAPDWFRSGPAMVLGAGGAARAIIHALKQRGVKDIRIVNRTLLRAQELADRFGRGVSAHASAATDELLADTGLLINTTALGMHGNEGLPADPKRLPGTAIVTDIVYVPLQTPLLAAAARCGLKTVDGLGMLLHQAAPGFEHWFGKRPVVTPALRAAIVADLGAT*