ggKbase home page

SCN18_30_10_14_R5_P_scaffold_4117_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(99..1817)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 579.0
  • Bit_score: 1038
  • Evalue 0.0
2-isopropylmalate synthase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TH38_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 579.0
  • Bit_score: 1038
  • Evalue 0.0
2-isopropylmalate synthase similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 579.0
  • Bit_score: 1038
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1719
ATGAACGCACGAGAACAAGTCCACGCGCAGCCCCACAAGGGCATGCCGGATGCGCCCCGCAAATACCAACCCTATCCGACCGTCGGGCTCCCCGACCGGACCTGGCCATCCAAGGTCATTGAAAAAGCGCCGATCTGGTGCTCCGTCGATCTGCGCGACGGCAACCAGGCGCTGATCGACCCGATGGGGCATGATCGCAAGGCGCGCATGTTCCAGCTCTTGCTCGACATGGGCTTCAAGGAAATCGAAGTCGGCTTTCCCTCGGCCTCGCAGACGGATTTCGACTTCGCCCGCTGGTGCATCGAGGAAGGCAACGTCCCCTCGGACGTGTCGCTGCAGGTGCTGGTGCAATGCCGGCCTGAACTCATCAGCCGCACCTTCGAGGCCTTGCAGGGCGCGACACGGCCCATCGTCCATTTCTATAATTCCACCAGCGAATTGCAGCGACGCGTGGTGTTTGAAAAGGACGTGCCGGGCATCAAGCAGATCGCCACCGACGCTGCCAAGATGATCACCGACATGGCCGCCAAAGCAGGTGGCGGCTATCGCTTCCAGTATTCGCCGGAAAGCTTCACCGGCACCGAACTCGAGGTGGCGCTGGAAATCTGCAACGCTGTCACCGAGATCGTGAAGCCGACACCCGACAACAAGCTCATCGTCAACCTGCCGTCCACGGTGGAAATGTCGACGCCCAACATCTATGCCGACCGCATCGAATGGATGATCCGGCATCTCGACAACCGCGAGAACCTCATCATCTCGCTGCATCCGCATAATGACCGCGGCACCGGCATCGCCACGACCGAGCTCGGCCTGATGGCTGGCGCCGACCGCGTCGAAGGCACGCTGTTCGGCAATGGCGAGCGCACCGGCAACGTCGATATCGTGACGCTGGCGCTCAACATGTACACGCAAGGCGTCGATCCAGAACTCGACTGCTCGGATATTCCGCGCATGAAGGCGGTCTACGAATATTCGAACCAGCTCAAGATCCCGGAGCGCCACCCTTACGTTGGCGAACTGGTCTACACGGCTTTCTCCGGCTCGCACCAGGACGCCATCAACAAGGGCATGAAGGCCTTGAAGAAGGCCAACAAGGAGATCTGGGAGGTCCCCTACCTGCCGATCGACCCGCAGGATGTCGGCCGCAGCTATGAGGCGATCATCCGCATCAACTCGCAGTCCGGCAAGGGCGGCATCGCCTATGTCCTGCAAGCCGACTACGGCCTCAACCTGCCGCGCAACCTGCAGATCGAGTTCAGCCAGGACATCCAGGCCATCACCGATGCCGAGGGCAAGGAAGTTCCGGTAAAGCGCATCTATGAGCGCTTTCTCGAAGCCTATGTCGACCAGCCCCGCGCACGGCTGAAATTCGTCGACCACCACACCTATCCCGACACGGAAGTGAAGGGCCGGCGGCTTATCGAGGCGACGATCCTCGACAAGGGCAAAGAAGTGAAGATCACCGGCAGCGGCACCGGCCCCATCGACGGCTTCGTCGATGCACTTTCGCGGCATATCGGCGTCGAGATGTCGGTGGCGGACTACTCCGAGCATTCCATGCAGCGCGGCTCCAACGCCGCGGCCATCTGCTACATGGAAATGGAGTACCCGGGCGGCAAGATTTTCGGCGCCGGCATCAACACCAACATTTCCGCCGCATCGCTTGAAGCCATCGTGTCTGCGGCCAACCGCATCCTCGGCAAAAAAGCCGGCTGA
PROTEIN sequence
Length: 573
MNAREQVHAQPHKGMPDAPRKYQPYPTVGLPDRTWPSKVIEKAPIWCSVDLRDGNQALIDPMGHDRKARMFQLLLDMGFKEIEVGFPSASQTDFDFARWCIEEGNVPSDVSLQVLVQCRPELISRTFEALQGATRPIVHFYNSTSELQRRVVFEKDVPGIKQIATDAAKMITDMAAKAGGGYRFQYSPESFTGTELEVALEICNAVTEIVKPTPDNKLIVNLPSTVEMSTPNIYADRIEWMIRHLDNRENLIISLHPHNDRGTGIATTELGLMAGADRVEGTLFGNGERTGNVDIVTLALNMYTQGVDPELDCSDIPRMKAVYEYSNQLKIPERHPYVGELVYTAFSGSHQDAINKGMKALKKANKEIWEVPYLPIDPQDVGRSYEAIIRINSQSGKGGIAYVLQADYGLNLPRNLQIEFSQDIQAITDAEGKEVPVKRIYERFLEAYVDQPRARLKFVDHHTYPDTEVKGRRLIEATILDKGKEVKITGSGTGPIDGFVDALSRHIGVEMSVADYSEHSMQRGSNAAAICYMEMEYPGGKIFGAGINTNISAASLEAIVSAANRILGKKAG*