ggKbase home page

SCN18_30_10_14_R5_P_scaffold_4268_6

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 3387..3551

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: COBW domain-containing protein C15D4.05-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1A1E3 similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 54.0
  • Bit_score: 99
  • Evalue 8.30e-19
Protein cobW {ECO:0000313|EMBL:CCV07649.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 54.0
  • Bit_score: 99
  • Evalue 1.50e-18
cobalamin synthesis protein cobW similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 54.0
  • Bit_score: 95
  • Evalue 4.40e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 165
ATGACCGCCACAGCTACGCGCGTTCCCTGCACTGTCGTCACCGGCTTTCTCGGCGCGGGCAAGACTACGCTGATCCGCCACTTGCTGGAACATGCCAAGGGCAAGCGCCTCGCCCTTATCGTCAACGAATTCGGCGACAGTGGCGTTGATGGTGAAATCCTCTAG
PROTEIN sequence
Length: 55
MTATATRVPCTVVTGFLGAGKTTLIRHLLEHAKGKRLALIVNEFGDSGVDGEIL*