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SCN18_30_10_14_R5_P_scaffold_3144_6

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 5233..6756

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CFD28F related cluster n=1 Tax=unknown RepID=UPI0003CFD28F similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 484.0
  • Bit_score: 792
  • Evalue 1.90e-226
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 489.0
  • Bit_score: 800
  • Evalue 7.60e-229
YidC/Oxa1 family membrane protein similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 484.0
  • Bit_score: 792
  • Evalue 7.10e-227

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1524
ATGGAAAACAACCGTAACTTCTTCATCACCATCGCGCTGTCGGTGCTGATCCTGACGCTGTGGCAAGTCTTCTATATGAACCCGCGCATAGAAGCGCAGCGTGAAACCGCAAAGGTGGAAGCAAGCCGCGCCGAAAGCGAGGCCGCCAAGACGACAACGCCCGCCGGAACGGCAACGCCAGGCGCCATCCCTTCGACATCGGGCAACGAAGCCGGAGGCATCCTAGGGCGCGAGGAGTTGATCGCTTCGACGCAGCGCGTCAAAATCGATACGCCGCGCCTCCAGGGTTCGATCAACCTGACCGGCGCGCGCCTCGACGACCTCAAGCTCAAGCAGTACCACGAGACCGTCGACAACAGTTCGCCCGAGATCGAGCTGCTCAATCCGGCCGCATTGCCCAATGGCTACTATGCGGAAATCGGCTTCGTCGGCAGCGACACGACAGGCACGGTGCCGGGCCCAGAGACCGTATGGGCGGTGGATGGCAACGCGACGTTGACGCCCGCAACCCCGGTGACGCTGACCTTCACCAACGACAAGGGTCTTACCTTCAAGCGGACCTATTCCGTCGACGCCAACTACATGTTCACTGTATCCGACACTGTCCAGAACACCGGCGCGGCCGATATCACGCTCTCCAACTACGGACGCGTGACCCGTTTCGACAAGCCTACGACTGCCTCGATCTACGTCCTGCATGAAGGCCTGATCGGCGTCACCGGCGAGGAAGGCCTGCAAGAGCACAAGTACTCCGCAATGGAGGACGACAAGCAGTTCACGCCGGGCAAGTCGACCGACGGCTGGCTCGGCATTACCGACAAGTATTGGGCGGTGACGCTGGTGCCGACGGCAAAGCAACCCTTCCAGCCGCGCTTCGCCTATTTCGAGGACGGCCGCCCGCGCTACCAGTCCGATTTCCTCAGCGATCCGATCACCGTTGCCGCAGGCGAATCGACCACGGTGGAATCTCTGGTGTTCGCCGGCGCGAAAGAAGTCGGCACCATCAATGCCTATGAGCAGGAACGCGACATTCGCCGCTTCGACCTGCTGATCGACTGGGGCTGGTTCCACTTCATCACCAAGCCGATGTTCTGGCTGATCGACACGCTCTACAAGCTGCTCGGCAATTTCGGCCTCGCCATCCTCGCCACCACCGTCATCGTCAAGGCGGTGTTCTTCCCCCTGGCCAACAAGTCCTACGCTTCGATGGCCAACATGAAGAAGGTGCAGCCGAAGATGGTCGAGATCCGCGAGAAATACGCGGACGACAAGATGAAGCAGCAGCAGGCGATGATGGAGCTCTACAAGACCGAGAAGATCAACCCGATTGCAGGCTGCTGGCCGGTGGTGATCCAGATCCCGGTGTTCTTCGCTCTCTACAAGGTTCTCTACATCACCATCGAAATGCGCCATGCGCCGTTCTTCAGGACCTTGCAGCGCCCGATCCGACGTCGCTGTTCAACCTGTTCGGCCTGTTGCCCTTCGCCGTGCCGACGCTGCTGCACATCGGTGTCTGGCCGCTGA
PROTEIN sequence
Length: 508
MENNRNFFITIALSVLILTLWQVFYMNPRIEAQRETAKVEASRAESEAAKTTTPAGTATPGAIPSTSGNEAGGILGREELIASTQRVKIDTPRLQGSINLTGARLDDLKLKQYHETVDNSSPEIELLNPAALPNGYYAEIGFVGSDTTGTVPGPETVWAVDGNATLTPATPVTLTFTNDKGLTFKRTYSVDANYMFTVSDTVQNTGAADITLSNYGRVTRFDKPTTASIYVLHEGLIGVTGEEGLQEHKYSAMEDDKQFTPGKSTDGWLGITDKYWAVTLVPTAKQPFQPRFAYFEDGRPRYQSDFLSDPITVAAGESTTVESLVFAGAKEVGTINAYEQERDIRRFDLLIDWGWFHFITKPMFWLIDTLYKLLGNFGLAILATTVIVKAVFFPLANKSYASMANMKKVQPKMVEIREKYADDKMKQQQAMMELYKTEKINPIAGCWPVVIQIPVFFALYKVLYITIEMRHAPFFRTLQRPIRRRCSTCSACCPSPCRRCCTSVSGR*