ggKbase home page

SCN18_30_10_14_R5_P_scaffold_5386_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 1937..2617

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJ02_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 219.0
  • Bit_score: 367
  • Evalue 6.80e-99
outer membrane lipoprotein carrier protein LolA similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 219.0
  • Bit_score: 367
  • Evalue 1.90e-99
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 219.0
  • Bit_score: 367
  • Evalue 9.60e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGACCAAAGATACACGCGCCGATTTTGCCCTCACGCGCCGCCGCCTTCTCGGCTTCGGGCTGGCATTTGCCGGCGCTTCGGCGCTCAACATCGTGCCCGGTTTCCGCCTGCTGGCGTCGGCGCAGGCCGCCGTGCCGGAAGCCGCCCAGAAGATCGCGGACCATTTTTCTTCGGTCAAGACGATGAGCGGCGAGTTCGTGCAGTTCGGCCCCAAGGGCGAGCAGACCGGCGGCAAGTTCTTCCTCGAACGCCCGGGCAAGATCCGCTTCAACTATGAAGGGCCGTCCAATTTCCAAGTCGTGTCGGACGGAAATTCGGTGGTCATCCTCAACAAGAAGCTGAAAACCTCGGATCTTTATCCGTTGTCGAAGACACCGCTCAAGCTGCTGCTGGACAACCGGATCGACCTGTCCGGCCAACTGGTCCAGAGCGTCAAGCAGGAAGACGACCTCACCACCATTCAACTGGCGGACAAGTCGGTTTTCGGGAATTCCAAGATCACCATGATGTTCGACCCGAACACCTATGAGCTGCGCCAGTGGACCATCACCGATGCGCAGGGCAAGGACACGACTGTGATGATCTTCAACGTCAAGCAGGGCGTGGACTTCGCCGCCAACACATTTGCCATCGACTACCGCGCAAATCGCGAACTCAACTCGCGCCAGAGTCAGAAGTAG
PROTEIN sequence
Length: 227
MTKDTRADFALTRRRLLGFGLAFAGASALNIVPGFRLLASAQAAVPEAAQKIADHFSSVKTMSGEFVQFGPKGEQTGGKFFLERPGKIRFNYEGPSNFQVVSDGNSVVILNKKLKTSDLYPLSKTPLKLLLDNRIDLSGQLVQSVKQEDDLTTIQLADKSVFGNSKITMMFDPNTYELRQWTITDAQGKDTTVMIFNVKQGVDFAANTFAIDYRANRELNSRQSQK*