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SCN18_30_10_14_R5_P_scaffold_4624_5

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(2024..3298)

Top 3 Functional Annotations

Value Algorithm Source
Exopolysaccharide transport protein family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F9U1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 436.0
  • Bit_score: 605
  • Evalue 2.10e-170
Exopolysaccharide transport protein family {ECO:0000313|EMBL:CCV13240.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 436.0
  • Bit_score: 605
  • Evalue 3.00e-170
exopolysaccharide transport family protein similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 433.0
  • Bit_score: 446
  • Evalue 6.10e-123

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
AACCTGATCCAGCGGCTGCGCGACCGCCAGGTGCAGTTGAAGTCGGACATTGCCGACCTCTCGACGACCCTGCTTGAAGGTCATCCGCGCATCCGGGCCCTGCGTTCGCAATTGTCGGACCTTGATCGCCAGATTCGCGTCGAGGCCGAGAAGGTGTTGGCGGCGATGATCACCGAGGCGCAGACGGCGCAGGCGAGGGAAGATCAACTCGTCGGCGACGTGAACAAGTTGAAAGCGCAGGCGGCGCGTGCCGGCGAACAGGAAGTGCAGCTCAATGCACTGGAGCGCGAGGCGAATGCCCAGCGCCAGTTACTCGAATCCTACATGACGCGTTACCGCGAGGCGTCGTCCCGGCAAGATCGCAACTACCTTCCCGTGGATGCTCGCGTCTTCTCGCGCGCCACGGTGCCGTCCGAACCCTATTTTCCCAAGACCGTGCCGATTGTCGGCGCAGCCTTTGTCGGCTCGCTTCTGTTGATGGCCGTCATCACGCTCTTGAGCGAGCTGTTTTCCGGCAGGGCGATGCGTCCAGCCAAAGGCGCAAAGCTGGAGCCGGTAGAAGAAATTGAGATGCCGCCGCCGGTGCGCGGTGCAGCCGACGATATTGCCGAAGCACGGCTGGCTGCTCCTGCGCGGGAAATTGTCGACATCGAGGAAGCCGCGGCGCCTCGCCCAAATCTGGGCGAGATCGACATCGAGAAGGCTGCCGAAAAGCTCATCGCCGGTGGTGCGGGCCGTGCCATCTTCATTTCGCCGCAGGGCGACGACGCGGCGGCGAGTTCCATTCTGGTCGCGCGCGAGGTTTCGGACGCAGGCTTGCGTGTCATTCTCCTTGACCTGACCGCGTCGGGGGCTGCCTCGCGTGCCATGCTGGAGAGCGTCCTGTTCCCGGGCATAACCAATCTGCTCTCATCGCAGGCTCAGTTCAGCGACGTGATCCATCCCGATCAGTTTTCGGACTGCCATGTCATCCCGGTCGGCACCGCCGATCCGGTTCGCGCTATGCGCGCCGCCGACCGTTTGCCGATCATCATGCAGTCTCTGACCACTGCCTACGATCTGGTCGTGGTCGAATGTGGCGCTACCGATGCGCAGGGCATCCGCCGTTTGGCTGGCGAAGACACGGAAGTGTTCGTGAGCGTGCTGGAAGCGGCGGACAGCGTGGTGCAGGCCACCGTCAAGCTGATCGAAAATGGCTACCCGGATGTGATTCTGGTGACGCCGGCTGGACATGACACGCCCGGCACGCCGCTACCCGGAAAGTCTGCTGCCTGA
PROTEIN sequence
Length: 425
NLIQRLRDRQVQLKSDIADLSTTLLEGHPRIRALRSQLSDLDRQIRVEAEKVLAAMITEAQTAQAREDQLVGDVNKLKAQAARAGEQEVQLNALEREANAQRQLLESYMTRYREASSRQDRNYLPVDARVFSRATVPSEPYFPKTVPIVGAAFVGSLLLMAVITLLSELFSGRAMRPAKGAKLEPVEEIEMPPPVRGAADDIAEARLAAPAREIVDIEEAAAPRPNLGEIDIEKAAEKLIAGGAGRAIFISPQGDDAAASSILVAREVSDAGLRVILLDLTASGAASRAMLESVLFPGITNLLSSQAQFSDVIHPDQFSDCHVIPVGTADPVRAMRAADRLPIIMQSLTTAYDLVVVECGATDAQGIRRLAGEDTEVFVSVLEAADSVVQATVKLIENGYPDVILVTPAGHDTPGTPLPGKSAA*