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SCN18_30_10_14_R5_P_scaffold_4702_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 2..472

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: choline dehydrogenase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C10D4C similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 143.0
  • Bit_score: 253
  • Evalue 9.90e-65
Choline dehydrogenase {ECO:0000313|EMBL:ESZ28887.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 143.0
  • Bit_score: 251
  • Evalue 4.10e-64
glucose-methanol-choline oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 143.0
  • Bit_score: 248
  • Evalue 9.00e-64

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
GGCGTCTCCTACGCCTACCGCAATGCCGGCGACACCATCGCGCGGCTTCTCGTCCGCTCGGCCAATCCGCGCGACTATCCGAAGATCACGCCCAATGCCTTCTCGACCAACGAGGACGTTTCGGAGATGCTGGATGCGGTGAAATTCCTGCGCAAGCTGGCTTCCATGCCGGCCATCGCCGAGATCGTGGAGGAAGAGGTTTTGCCAGGTCCGCCAATCACTTCCGACGCCGACCTGATTCAGGATTTCAGGAAGCGTTCGGGCACGGTCTACCACCCGGTTTCCACTTGCCGCATGGGCCCCGATCCCTCGCGCGCCGTGGTCGATCCGCGCCTGCGCGTCCACGGCCTGTCGGGCCTGCGCGTCATCGACGCCTCGATCTTTCCCGACAACGTCACCGGCAACACCAACGCCGCATCGATCATGACCGGCTGGAAAGGCGCGCTCATGGTTCTGGAGGACAATCGATGA
PROTEIN sequence
Length: 157
GVSYAYRNAGDTIARLLVRSANPRDYPKITPNAFSTNEDVSEMLDAVKFLRKLASMPAIAEIVEEEVLPGPPITSDADLIQDFRKRSGTVYHPVSTCRMGPDPSRAVVDPRLRVHGLSGLRVIDASIFPDNVTGNTNAASIMTGWKGALMVLEDNR*