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SCN18_30_10_14_R5_P_scaffold_2786_6

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 8924..9223

Top 3 Functional Annotations

Value Algorithm Source
HlyD family type I secretion membrane fusion protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HMX8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 85.0
  • Bit_score: 109
  • Evalue 1.50e-21
HlyD family type I secretion membrane fusion protein {ECO:0000313|EMBL:EPE99909.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 85.0
  • Bit_score: 109
  • Evalue 2.10e-21
type I secretion membrane fusion protein, HlyD family similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 89.0
  • Bit_score: 102
  • Evalue 3.90e-20

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGAAAGCCGCCCGCGCCAAGCTCTCGCTCGCCAAGACCGACACCGCGCCGGTTCCGGCTCCAGTGGAGCCGCCTGTCCTTCGCATAGTGCAGGCGCCGCCGGTACCGGCGATACTTGAGTTCCAGCCCGACGCCGTCGAGCTTGAGCAGAGGCCGCCGCCCCGGTTGGCGCGCATGACGCTCTATGGCATCCTGTTTTTCGTTGCATGCGCCATCACCTGGGCTTCGCTGTCGAGCATTGACGAGATCGTCGTCGCCCCCGGCAAGCTCATCACGACGCGGCCAATGCTGGTGGTGCAG
PROTEIN sequence
Length: 100
MKAARAKLSLAKTDTAPVPAPVEPPVLRIVQAPPVPAILEFQPDAVELEQRPPPRLARMTLYGILFFVACAITWASLSSIDEIVVAPGKLITTRPMLVVQ