ggKbase home page

SCN18_30_10_14_R5_P_scaffold_2848_3

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 3028..4029

Top 3 Functional Annotations

Value Algorithm Source
Sugar ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7EZJ3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 333.0
  • Bit_score: 594
  • Evalue 5.10e-167
Rhamnose ABC transporter, periplasmic rhamnose-binding protein {ECO:0000313|EMBL:CDX18884.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 333.0
  • Bit_score: 600
  • Evalue 1.30e-168
rhamnose ABC transporter, periplasmic rhamnose-binding protein similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 327.0
  • Bit_score: 503
  • Evalue 3.30e-140

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGAAAGCGTTTCGACTGGCACTTCTTGCCTCGGCTGTCCTCTTGGCACCGTCCGGACTGGCGTTCAGCCAGGAATGCGCCAAGGAACCGGTAACAGTCGGCTTCTTGCCCAAGCTGGACACCGACCCCTATTTCAAGGTCGCCCAGCAGGGTGCCGAAGAGGCCGCCAAGGAGATCGGCGGCAAGGTCGTCCAGGTCGCGCCTTCGCAGGCTACTGCCGAAGCCCAGATCGAATTCATCAACAGCCTCGTGTCGCAGCAGGTTGGCGTCATCGCCATCTCGGCCAACGATGCGAATGCGGTTGCGCCGGCGCTGAAGCGCGCCACCCAGCAGGGCGTGCGCGTCGTGTCCTACGATTCCGACGTGGCGGCCGATGCCCGTTCGGTGTTCATCAATCAGGCCAAAGGCGACAGCCTTGCCGAAATGATGCTGGAAAGCGCCTACAACCTGATCGGCGGCGAAGGCGAGTTCGCAATCCTGTCCTCGACGCCGACGGCAACCAACCAGAATGCCTGGATCGACTTCATGAAGAAGAAGATGGAAGCCGAGCCGAAATTCAGCAAGATGAAGCTGGTTCAGGTCGCCTATGGCGAAGAGAGCGAGCAGGTCAACCAGCAGCAGGCTCTGGCGCTGGTGCAGGCCTTTCCCGACCTGAAGGCGATCATCGTTCCGGCCGGCATCGGCCTGCCGGCAGCGGCGCGCGCGCTTGAAGAAGCAGGCATGATCGGCAAGGTCAAGCTGACCGGCCTTGCACCGGCGACGCTCATCTCGAAGTACATCAAGGATGGCGCTGCACAGGACATCTGGTGGAACGTCTCCGACCTTGGCTACCTGACCTACCAGACGGCCCAGGCGCTGGCTCAGTGCAAGATCACCGGCAAGGAAGGTGAGAAGTTCCAGGCCGGTCGCCTTGGCGAGTACACCATCGGCGCAAGCGGCGAGCTCGTTCTTGGCCCGGCAAAGATCGTCACGCCGGACAACCTGGCCGAGTTCAAGTTCTGA
PROTEIN sequence
Length: 334
MKAFRLALLASAVLLAPSGLAFSQECAKEPVTVGFLPKLDTDPYFKVAQQGAEEAAKEIGGKVVQVAPSQATAEAQIEFINSLVSQQVGVIAISANDANAVAPALKRATQQGVRVVSYDSDVAADARSVFINQAKGDSLAEMMLESAYNLIGGEGEFAILSSTPTATNQNAWIDFMKKKMEAEPKFSKMKLVQVAYGEESEQVNQQQALALVQAFPDLKAIIVPAGIGLPAAARALEEAGMIGKVKLTGLAPATLISKYIKDGAAQDIWWNVSDLGYLTYQTAQALAQCKITGKEGEKFQAGRLGEYTIGASGELVLGPAKIVTPDNLAEFKF*