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SCN18_30_10_14_R5_P_scaffold_4951_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 700..2019

Top 3 Functional Annotations

Value Algorithm Source
O-antigen polymerase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6J0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 439.0
  • Bit_score: 736
  • Evalue 1.10e-209
O-antigen polymerase {ECO:0000313|EMBL:CCV11783.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 439.0
  • Bit_score: 736
  • Evalue 1.50e-209
lipid A core-O-antigen ligase-like enyme similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 438.0
  • Bit_score: 718
  • Evalue 1.10e-204

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1320
ATGAGCAATACCGGCAACCTGAGAAGAACTGAGCGCGCGCCGCTTGCCGCTGCGTTCACGCGTGACGGCGTGGCAACGGCGCTGGCAGCGCTGCTCTTCACCCTCTTGCTGGTTTCGTTCCGTCCCTTCCAGCCGTCCGGTGCGGAAGGCAGCGCTGACGGCGGCGACATCGTCAACCAGCTCGGCTTCAGCGCGCTGGGCGCTGCCTCGCTGTTTGCGCTTACAACGCTTGCCGACCCCAAAGTTGTCCGATCCCTGCTCAGCCCTTCATGGCTGCTGACGCTGGGGTTTTTCCTGCTTTCGGTCGCCATGGCGGCGGATCCATCCTCGGCCATGCGCACCGCCTTCTTCACCTTGATTGCGATGACCGCGGTCGCCACCATCCTGGCCTTGCCGCGCGATGCGGAGGCGTTTTCCGGCGTCCTCATCTTCACCATCGTGGTGGTGATGGGCCTGTCCTATGTCGGGCTGGTCGTGTTTCCGAACGAGGCGCTGCACACCACCGCTTCGCAGGAGCCGGAACATGCCGGCCTGTGGCGCGGCGTGTTTGCGCACAAGAACATCGCCGGACCGGTGATGGCCTGCTTCAGTTTCGCCGGGCTCTATCTGTTCCGGCGCGGCCGGCGCATCTGGGGCGCGCTGATCTTTATCGCCGCCATGAATTTCATGCTGCACACCGGCTCCAAGACAACCGCCGGACTGGTGCCGTTCTCGATCCTCATCGTCATGGTGCCGGGCCTCGTCGGCATGCGGCTCGGCACGCCGGTGCTGTTCATGCTGGCCATCGTAGCGACCGCGCTCGGCACGCTCGGCATCGTCTTCGTCGAGCCGATGAAGGCCTTGGCCGCGCACTATTTCCCGAACCTGACCTATACCGGTCGCACCACTCTGTGGGAGTTTGCCGGCGAGATGCTGGCGAAGCGCCCATGGACCGGCTACGGCTATGAGAGCTTCTGGGGCACGCCGCTTCTTTTGAACCAGGACCAGCCGTTCGACCGGGCCTGGGATATCCGCTCCATCGTGCATGGCCACAACGGCTATCTCGACACCGCCGTGCTGATGGGCATTCCGGCGCTGTGCGTGGTTGCCTACACCTTCCTCGTCGCGCCGCTGCGCGACTACATGCGCATCCCGCTCTTGAAGGAAAACATCTATCTCGGCGATTTCTTCATGATGGTGGTGCTGTTTGCGGCGCTCAACGCATTTCTGGAAAGCTTCTTCTTCCGCCGCGCCGATCCGGTCTGGCTGTTCTTCCTGTTCGGCCTTTTCGGCCTGCGGCAAGTTTCGCTGCGCCCGCTTGCAACCATCCGCCCCAATTGA
PROTEIN sequence
Length: 440
MSNTGNLRRTERAPLAAAFTRDGVATALAALLFTLLLVSFRPFQPSGAEGSADGGDIVNQLGFSALGAASLFALTTLADPKVVRSLLSPSWLLTLGFFLLSVAMAADPSSAMRTAFFTLIAMTAVATILALPRDAEAFSGVLIFTIVVVMGLSYVGLVVFPNEALHTTASQEPEHAGLWRGVFAHKNIAGPVMACFSFAGLYLFRRGRRIWGALIFIAAMNFMLHTGSKTTAGLVPFSILIVMVPGLVGMRLGTPVLFMLAIVATALGTLGIVFVEPMKALAAHYFPNLTYTGRTTLWEFAGEMLAKRPWTGYGYESFWGTPLLLNQDQPFDRAWDIRSIVHGHNGYLDTAVLMGIPALCVVAYTFLVAPLRDYMRIPLLKENIYLGDFFMMVVLFAALNAFLESFFFRRADPVWLFFLFGLFGLRQVSLRPLATIRPN*