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SCN18_30_10_14_R5_P_scaffold_4412_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 1205..1798

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTQ3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 196.0
  • Bit_score: 305
  • Evalue 3.60e-80
Membrane protein {ECO:0000313|EMBL:EZQ12829.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 195.0
  • Bit_score: 307
  • Evalue 1.30e-80
lytic transglycosylase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 195.0
  • Bit_score: 291
  • Evalue 1.20e-76

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGTCCGCGTACAGTTTTAGTCGAATTGTTCCTATCCTCGCCCTGCTTGCGCTTGCCTCCTGCGCAACGCCGCCGAGCCAGATCAACAATGTCTGCGCAGTGTTCGACCAGCGCGACGGCTTCGTCGGCAATTGGCGCACCGCTGCCGAACAGACCGAACGCAAATATGGCGTACCGGTGCCGGTGCTGATGGCGACAGTGCGCAAGGAATCCGGTTTCAAGGGCAATGCGCAGCCGCCGCGCGCGACAGTGCTTGGATTCATTCCGTGGAAGCGACCCTCCAGTGCCTATGGCTACTCGCAAGCGCTTGATGGAACCTGGGCGCAATACCGCGCAGAAAGCGGCAACTTCGCCGCCCGCCGCAGCAGCTTTGCCGACGCCATAGACTTCGTCGGCTGGTATCACGCCAAGAGCGCCGACAGCCTCGGCATCGACCGCACCGACACCTACAATCTCTACCTCGCCTATTATTCCGGCTGGACCGCCTACAAGCGCGGCGATTGGCGCAGCAATAGCGGGATACAGAGATACGCGCGCGAGACGGACGAGATGGCCCGCAACTACGCGGCGCAGTTACAGACCTGCACGCAATAG
PROTEIN sequence
Length: 198
MSAYSFSRIVPILALLALASCATPPSQINNVCAVFDQRDGFVGNWRTAAEQTERKYGVPVPVLMATVRKESGFKGNAQPPRATVLGFIPWKRPSSAYGYSQALDGTWAQYRAESGNFAARRSSFADAIDFVGWYHAKSADSLGIDRTDTYNLYLAYYSGWTAYKRGDWRSNSGIQRYARETDEMARNYAAQLQTCTQ*